bvanaken / clinical-assertion-dataLinks
Dataset for the NLPMC @ NAACL 2021 Paper: Assertion Detection in Clinical Notes: Medical Language Models to the Rescue?
☆16Updated 4 years ago
Alternatives and similar repositories for clinical-assertion-data
Users that are interested in clinical-assertion-data are comparing it to the libraries listed below
Sorting:
- Implementation of the BLUE benchmark with Transformers.☆20Updated last year
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- ☆67Updated 3 years ago
- BioELECTRA☆50Updated 4 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆153Updated 2 years ago
- SciFive: a text-text transformer model for biomedical literature☆98Updated last year
- Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system☆26Updated 2 years ago
- Code for the emrQA question answering dataset☆152Updated 3 years ago
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- Pre-trained Language Model for Biomedical Question Answering☆125Updated 2 years ago
- ☆38Updated 3 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆46Updated 5 years ago
- PubMed PICO Element Detection Dataset☆57Updated 7 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆114Updated 2 years ago
- Weakly supervised medical named entity classification☆72Updated 3 years ago
- ☆63Updated 2 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆97Updated last year
- Transformers for Clinical NLP☆26Updated 5 months ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆66Updated 4 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆49Updated 10 months ago
- ☆24Updated 7 months ago
- ☆101Updated 3 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 6 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 7 months ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆90Updated 3 years ago
- Dataset for medical question summarization introduced in the ACL 2019 paper "On the Summarization of Consumer Health Questions" (A. Ben A…☆31Updated 2 years ago
- EMNLP 2022: Biomedical NER for the Enterprise with Distillated BERN2 and the Kazu Framework☆11Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 3 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆213Updated 2 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆62Updated 3 years ago