Scalable Protein Language Model Finetuning with Distributed Learning and Advanced Training Techniques such as LoRA.
☆33Apr 12, 2024Updated 2 years ago
Alternatives and similar repositories for finetune-esm
Users that are interested in finetune-esm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Feb 14, 2025Updated last year
- Steering discrete diffusion models with labeled data for protein fitness optimization☆30Nov 1, 2025Updated 8 months ago
- ☆21Oct 22, 2024Updated last year
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆25Aug 30, 2025Updated 10 months ago
- ☆14Sep 6, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆15Oct 16, 2023Updated 2 years ago
- GraphPart, a data partitioning method for ML on biological sequences☆35Oct 26, 2023Updated 2 years ago
- DeepSEA implements in PyTorch☆25Jun 5, 2019Updated 7 years ago
- Genome-wide association studies identify genetic variations associated with a target disease or trait. Researchers and clinicians can use…☆11Apr 12, 2024Updated 2 years ago
- Machine learning workflows for analyzing high-throughput protein data☆27Nov 22, 2016Updated 9 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Sep 21, 2022Updated 3 years ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆23Apr 22, 2026Updated 2 months ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆61Nov 5, 2025Updated 8 months ago
- Protein sequence domain annotation with a language model☆33Apr 21, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A model named ATMOL for predicting molecular property☆10May 2, 2022Updated 4 years ago
- Detection of remote homology by comparison of protein language model representations☆64Dec 16, 2024Updated last year
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆136Apr 25, 2026Updated 2 months ago
- Protein function prediction using protein structures and deep graph neural networks.☆22Jan 24, 2025Updated last year
- Bokeh extensions to plot molecules easily☆11Jul 14, 2025Updated last year
- ☆14Oct 9, 2022Updated 3 years ago
- ProCare: A Point Cloud Registration Approach to Align Protein Cavities☆30Dec 30, 2022Updated 3 years ago
- ☆10Jun 18, 2020Updated 6 years ago
- 本项目采用Firefly模型训练框架，使用LLAMA-2模型对多项选择阅读理解任务（Multiple Choice MRC）进行微调，取得了显著的进步。☆11Sep 16, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- 整理自己每天汲取到的知识并分享给大家☆14May 26, 2022Updated 4 years ago
- a deep learning based drug target interaction prediction model☆11Nov 5, 2022Updated 3 years ago
- Deep Boosted Molecular Dynamics☆13Aug 27, 2024Updated last year
- Generating Protein Variants with Different Generative Models (HMM, VAE, ESM-2, ProtGPT2)☆11Mar 14, 2024Updated 2 years ago
- A biological dual-language foundation model☆12Jun 16, 2025Updated last year
- Wrapper tool for ancestral sequence and indel reconstruction using IQ-TREE☆13Oct 20, 2025Updated 9 months ago
- ☆17Jan 29, 2025Updated last year
- ☆14Dec 10, 2018Updated 7 years ago
- ☆35Dec 15, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆52Aug 19, 2024Updated last year
- ☆14Sep 3, 2024Updated last year
- A tool for analyzing RAS protein structures☆62Mar 19, 2024Updated 2 years ago
- A Go library using the Least Recently Used (LRU) strategy for efficient caching☆13Mar 18, 2025Updated last year
- ☆16Mar 1, 2025Updated last year
- A Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural info…☆11Jul 14, 2026Updated last week
- Extract ligands from original PDB file☆10Nov 1, 2019Updated 6 years ago