[G]enomic [P]ositioning with [Py]thon
☆15Jun 19, 2026Updated 3 months ago
Alternatives and similar repositories for gppy
Users that are interested in gppy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- official repository for the UEA sRNA Workbench☆10May 31, 2023Updated 3 years ago
- ☆13Oct 5, 2023Updated 3 years ago
- Model-based analysis of APA using 3' end-linked reads☆13Aug 14, 2021Updated 5 years ago
- ☆19Mar 31, 2025Updated last year
- bioinfo workflow based on snakemake☆15Feb 22, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Ribo-seq data analysis tool☆10Sep 10, 2019Updated 7 years ago
- An unbiased method for genome-wide CBE off-targets assessment☆14Mar 9, 2023Updated 3 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆23Jun 27, 2017Updated 9 years ago
- Dual-extraction method for phenotypic prediction and functional gene mining of complex traits☆14Oct 30, 2024Updated last year
- The tRNA adaptation index☆22Apr 25, 2025Updated last year
- ☆12Sep 8, 2026Updated last month
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Nov 11, 2022Updated 3 years ago
- An m6A-aware basecalling model to detect m6A modifications at single nucleotide resolution in individual reads (Cruciani, Delgado-Tejedo…☆18Sep 1, 2025Updated last year
- rnalib: a python-based transcriptomics library☆14Jul 27, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- release version☆62Jul 29, 2022Updated 4 years ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆19Jul 19, 2025Updated last year
- Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"☆13Aug 4, 2020Updated 6 years ago
- Obsolete!! Begin to turn to PrimerServer2☆10Jul 22, 2019Updated 7 years ago
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆40Nov 8, 2023Updated 2 years ago
- Codon optimizer for tissue-specific expression☆17Sep 26, 2024Updated 2 years ago
- Hybrid method based on a variable-order de bruijn Graph for the error Correction of Long Reads☆11Jan 20, 2021Updated 5 years ago
- ☆10Mar 11, 2025Updated last year
- Bioinformatics projects and code shared by Zhi John Lu☆10Jun 3, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Comparing and combining multiple metagenomic datasets☆16Oct 12, 2022Updated 3 years ago
- Fast-ish (and correct!) quantile normalization in Python.☆32Aug 6, 2026Updated 2 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆43Sep 30, 2026Updated last week
- optimization of ribosome P-site positioning in ribosome profiling data☆64Feb 24, 2025Updated last year
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆281Updated this week
- ☆12Sep 10, 2026Updated last month
- A set of scripts and functions for analyzing MeDIP-seq datasets☆16Feb 3, 2026Updated 8 months ago
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆46Jun 7, 2026Updated 4 months ago
- mesa package for Methylation Enrichment Sequencing Analysis☆16Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Rapsberry pi ➲ volumio ➲ bluetooth ➲ audio streaming ➲ setup script☆14Apr 10, 2018Updated 8 years ago
- This repository contains projects of Escort and Estag☆26Mar 27, 2025Updated last year
- Provides an Invoice Payment Gateway, mainly for B2B segment where instant payment via PayPal etc. is not a viable option.☆12Apr 7, 2014Updated 12 years ago
- exRNA Biomarker Discovery for Liquid Biopsy☆11Oct 29, 2020Updated 5 years ago
- A unified and modular interface to homology modelling software☆12Sep 27, 2023Updated 3 years ago
- Random Mad Libs generator, using Python, NLTK, and Markov chains to replace words with weirder ones.☆15Feb 16, 2014Updated 12 years ago
- Fork of https://code.google.com/p/ngs-analysis☆17Sep 14, 2013Updated 13 years ago