Alternatives and similar repositories for OnToma:

Users that are interested in OnToma are comparing it to the libraries listed below

• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆18Updated 8 months ago
• monarch-initiative / phenol
  phenol: Phenotype ontology library
  ☆23Updated 8 months ago
• RTXteam / RTX
  Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
  ☆33Updated this week
• monarch-initiative / phenomics-assistant
  LLM retrieval augmented generation agent for the Monarch Knowledge graph.
  ☆21Updated last week
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆51Updated last month
• phenopackets / phenopacket-tools
  An app and library for building, conversion, and validation of GA4GH Phenopackets.
  ☆13Updated last year
• OntoGene / OGER
  ☆24Updated 4 years ago
• geneontology / helpdesk
  The Gene Ontology Helpdesk
  ☆16Updated last month
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆58Updated last week
• monarch-initiative / biolink-api
  API for linked biological knowledge
  ☆64Updated 2 years ago
• monarch-initiative / monarch-disease-ontology-RETIRED
  THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
  ☆17Updated 4 years ago
• NCATSTranslator / ReasonerAPI
  NCATS Biomedical Translator Reasoners Standard API
  ☆36Updated 5 months ago
• monarch-initiative / pyphetools
  Python Phenopacket Tools
  ☆15Updated last month
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated 2 months ago
• INCATools / ubergraph
  Integrated OBO ontology store
  ☆44Updated 2 weeks ago
• mapping-commons / mh_mapping_initiative
  Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.
  ☆13Updated 2 months ago
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆24Updated 6 months ago
• monarch-initiative / loinc2hpo
  Java library to map LOINC-encoded test results to Human Phenotype Ontology
  ☆31Updated last year
• Knowledge-Graph-Hub / kg-obo
  A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub
  ☆32Updated 11 months ago
• monarch-initiative / dipper
  Data Ingestion Pipeline for Monarch
  ☆57Updated 2 years ago
• obophenotype / upheno
  The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
  ☆78Updated 3 weeks ago
• biopragmatics / bioversions
  🪝 What's the latest version for each database?
  ☆27Updated last week
• EBISPOT / EFO-UKB-mappings
  ☆13Updated 5 years ago
• AbbVie-ComputationalGenomics / genetic-evidence-approval
  ☆24Updated 4 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆46Updated 2 weeks ago
• TheJacksonLaboratory / hpo-web
  a web application to search and navigate the Human Phenotype Ontology (HPO)
  ☆14Updated 3 weeks ago
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆32Updated 7 years ago
• ncats / stitcher
  A stitching platform for InXight
  ☆16Updated 4 months ago
• jakelever / pubrunner
  A framework for keeping biomedical text mining result up-to-date
  ☆42Updated 4 years ago