opentargets / OnToma
Map your disease and phenotype terms to the Open Targets platform ontology
β21Updated 4 months ago
Alternatives and similar repositories for OnToma:
Users that are interested in OnToma are comparing it to the libraries listed below
- πΊοΈ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaβ¦β52Updated 2 weeks ago
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)β33Updated this week
- Github repo for the Experimental Factor Ontology (EFO)β57Updated this week
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.β22Updated 3 weeks ago
- Ontology cross-reference and mapping serviceβ18Updated 9 months ago
- phenol: Phenotype ontology libraryβ23Updated last month
- THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-buildβ17Updated 4 years ago
- An app and library for building, conversion, and validation of GA4GH Phenopackets.β13Updated last year
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubβ32Updated last year
- Draft cell type definitions from data - candidates for inclusion in CLβ12Updated 3 months ago
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.β79Updated last month
- The Gene Ontology Helpdeskβ16Updated 2 months ago
- API for linked biological knowledgeβ64Updated 2 years ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.β24Updated 7 months ago
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.β13Updated 3 months ago
- Data Ingestion Pipeline for Monarchβ57Updated 2 years ago
- Ontology Based Profile Matchingβ17Updated 2 years ago
- Integrated OBO ontology storeβ44Updated last month
- Python Phenopacket Toolsβ14Updated 2 months ago
- β10Updated last month
- Repository for the GA4GH phenopacket schemaβ84Updated 6 months ago
- A collection of useful python functions for looking up information and working with the Biolink Modelβ23Updated last month
- R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.β14Updated last month
- NCATS Biomedical Translator Reasoners Standard APIβ36Updated 6 months ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)β21Updated 3 years ago
- Communitiy-based Cell Line Ontologyβ18Updated 9 months ago
- Semantic data model of the set of common data elements for rare disease registrationβ12Updated last year
- β13Updated 5 years ago
- β24Updated 4 years ago
- Target prioritization using network representation learningβ11Updated 3 years ago