Alternatives and similar repositories for MS-LIMA-Standard

Users that are interested in MS-LIMA-Standard are comparing it to the libraries listed below

• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆17Updated last year
• danielatrivella / NP3_MS_Workflow
  A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis
  ☆13Updated this week
• jcapelladesto / geoRge
  geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics
  ☆11Updated 4 years ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆28Updated last year
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆24Updated 4 months ago
• biorack / simile
  ☆16Updated 3 years ago
• CSi-Studio / G-Aligner
  G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics
  ☆18Updated last year
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆28Updated 3 months ago
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆33Updated 4 years ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆13Updated this week
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆14Updated last month
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• bigbio / DLEAMSE
  A Deep LEArning-based Mass Spectra Embedder for spectral similarity scoring
  ☆11Updated 3 months ago
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆10Updated this week
• neilswainston / FragGenie
  ☆15Updated 4 years ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆14Updated 2 years ago
• sirius-ms / sirius-client-openAPI
  openAPI (swagger-condegen) based libraries for different programming languages like R, Python and Ruby
  ☆16Updated 3 weeks ago
• Philipbear / BUDDY_Metabolomics
  Molecular formula discovery via bottom-up MS/MS interrogation
  ☆14Updated last year
• pnnl / deimos
  ☆36Updated 3 months ago
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated 9 months ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• CSi-Studio / 3D-MSNet
  A point cloud based deep learning model for untargeted feature detection and quantification in profile LC-HRMS data
  ☆29Updated 2 years ago
• MolecularCartography / Optimus
  Workflow for LC-MS feature analysis and spatial mapping
  ☆18Updated 7 years ago
• domdfcoding / pynist
  PyMassSpec extension for searching mass spectra using NIST's Mass Spectrum Search Engine.
  ☆22Updated 2 weeks ago
• YuanyueLi / EntropySearch
  Search spectral library with entropy similarity
  ☆20Updated 5 months ago
• SimpleNumber / HUMOS
  HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …
  ☆11Updated 6 months ago
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆18Updated 2 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• madeleineernst / pyMolNetEnhancer
  ☆21Updated 2 years ago