Predict 5mC in PacBio HiFi reads
☆12Nov 2, 2022Updated 4 years ago
Alternatives and similar repositories for primrose
Users that are interested in primrose are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Call select base modifications in PacBio HiFi reads☆19May 29, 2026Updated 5 months ago
- Collection of tools for the analysis of CpG data☆115Jul 9, 2025Updated last year
- A repo contains historical and updated MTEC libraries.☆19Aug 28, 2026Updated 2 months ago
- HiCDCPlus☆20Jun 6, 2022Updated 4 years ago
- ☆25Feb 26, 2026Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python module for parsing, writing, aligning, and manipulating glycan structrures☆10Updated this week
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆15Nov 1, 2024Updated 2 years ago
- EasyHap is a cross-platform toolkit for regional haplotype analysis and visualization using phased VCF data from fungal, plant, and anima…☆21Oct 10, 2026Updated 3 weeks ago
- ☆10Mar 4, 2025Updated last year
- A Tool for low Coverage HiFi Data Assembly☆44Dec 27, 2025Updated 10 months ago
- Dynamic Elongation of a Genome Assembly Path☆32Oct 26, 2026Updated last week
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Nov 18, 2022Updated 3 years ago
- Bayesian analysis of hybrids☆12Feb 19, 2019Updated 7 years ago
- ☆21Jan 20, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- script that convert vcf file into genotype data matrix to input DIYABC program.☆12Jul 9, 2015Updated 11 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆55Feb 27, 2020Updated 6 years ago
- Natural hybridisation reduces vulnerability to climate change☆10Aug 5, 2026Updated 3 months ago
- Panaln: Indexing pangenome for read alignment☆10Apr 16, 2025Updated last year
- Project repository for the phase 3 main publication of the HGSVC☆13Feb 9, 2026Updated 8 months ago
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆23Oct 4, 2026Updated last month
- Methylatino phasing using PacBio CCS reads☆14Dec 13, 2024Updated last year
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆18Sep 6, 2025Updated last year
- A battery of methylation tools for PacBio HiFi reads☆58Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- EpiGePT: a pretrained transformer-based language model for context-specific human epigenomics☆34Jun 22, 2025Updated last year
- Python script for creating and analyzing simulated bpp datasets published in Flouris et al. 2019.☆10May 12, 2019Updated 7 years ago
- Pangenome-based genome inference☆184Oct 26, 2026Updated last week
- Evaluation of multiple genomic language model for clinical VEP☆11Oct 13, 2026Updated 3 weeks ago
- Python package designed for single-cell calling cards data☆16Jun 8, 2025Updated last year
- genomic variant frequency estimation☆12Sep 4, 2026Updated 2 months ago
- A Finetuned model for Enhancer prediction and our generative Cumulative Enhancer Dataset☆12Mar 26, 2026Updated 7 months ago
- ☆12Jun 15, 2026Updated 4 months ago
- Demultiplex Illumina FASTQ files☆10May 23, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆39Apr 25, 2023Updated 3 years ago
- Speed up your builds by caching Anaconda environments on GitHub Actions☆12Oct 23, 2022Updated 4 years ago
- Tandem repeats annotation tool☆13Oct 26, 2026Updated last week
- ☆16Apr 14, 2021Updated 5 years ago
- Corgi is a context-aware sequence-to-function model that predicts genomic sequencing tracks from DNA sequence and trans-regulator express…☆14Aug 13, 2026Updated 2 months ago
- ☆12Dec 4, 2023Updated 2 years ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆47Dec 18, 2025Updated 10 months ago