ViOTUcluster: A high-speed, all-in-one solution that streamlines the entire virome analysis workflow
☆25Aug 27, 2026Updated last week
Alternatives and similar repositories for ViOTUcluster
Users that are interested in ViOTUcluster are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Local version of the virus identification and analysis web server (tool set)☆118May 13, 2026Updated 3 months ago
- ☆11Feb 9, 2024Updated 2 years ago
- The viral taxonomic assignment pipeline☆46Updated this week
- A richly featured desktop platform for data analysis of bioinformatics. Especially, for quick sequence annotation and mutation analysis o…☆34Nov 6, 2024Updated last year
- ☆14Apr 3, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Mar 21, 2020Updated 6 years ago
- ☆23Jan 6, 2026Updated 7 months ago
- Phage virion protein classifier☆14Nov 6, 2024Updated last year
- Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.☆34Jun 18, 2023Updated 3 years ago
- SemiBin: metagenomics binning with self-supervised deep learning☆174Aug 3, 2026Updated last month
- ☆24Apr 13, 2026Updated 4 months ago
- ☆38Apr 15, 2024Updated 2 years ago
- ☆22Jan 14, 2024Updated 2 years ago
- ViromeScan allows the user to explore and taxonomically characterize the virome from metagenomic reads, efficiently denoising samples fro…☆13Feb 13, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A machine learning approach to alignment filtering☆16Jun 18, 2026Updated 2 months ago
- Module and script to remove contamination in assembled genomes before submission to ncbi☆14Jul 28, 2025Updated last year
- ☆15May 22, 2025Updated last year
- Extremely fast BAM depth calculation for WGS, exome, or targeted sequencing☆13Jan 25, 2019Updated 7 years ago
- DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data☆51Mar 12, 2026Updated 5 months ago
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆26Jan 8, 2026Updated 7 months ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated 2 years ago
- ☆37Dec 6, 2023Updated 2 years ago
- R package to run BEAST2☆11Dec 8, 2025Updated 8 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Taxonomic classification of viruses at Order and Family level☆21Mar 1, 2023Updated 3 years ago
- Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences☆16Aug 6, 2026Updated 3 weeks ago
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆18Nov 29, 2023Updated 2 years ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆38Feb 26, 2023Updated 3 years ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆11May 7, 2018Updated 8 years ago
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆22Dec 16, 2024Updated last year
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆36Aug 7, 2017Updated 9 years ago
- TreeBeST: Tree Building guided by Species Tree☆14Feb 17, 2011Updated 15 years ago
- SINA - Reference based multiple sequence alignment☆41Dec 13, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆26Aug 15, 2025Updated last year
- ☆38Nov 5, 2025Updated 9 months ago
- 现代应用统计 Modern Applied Statistics with R, INLA and Stan☆26May 12, 2026Updated 3 months ago
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆15Aug 26, 2024Updated 2 years ago
- Accurate identification of bacteriophages from metagenomic data using Transformer☆22Nov 6, 2024Updated last year
- Scripts to quality control for metagenomic raw data, including removing the adapters, low quality reads, bases or PCR duplicates☆18Aug 13, 2020Updated 6 years ago
- Interpretation and visualization of microbiome charts☆550Jul 22, 2025Updated last year