ViOTUcluster: A high-speed, all-in-one solution that streamlines the entire virome analysis workflow
☆21Jan 13, 2026Updated 3 months ago
Alternatives and similar repositories for ViOTUcluster
Users that are interested in ViOTUcluster are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Mar 21, 2020Updated 6 years ago
- ViromeScan allows the user to explore and taxonomically characterize the virome from metagenomic reads, efficiently denoising samples fro…☆13Feb 13, 2023Updated 3 years ago
- Extremely fast BAM depth calculation for WGS, exome, or targeted sequencing☆13Jan 25, 2019Updated 7 years ago
- R package to run BEAST2☆11Dec 8, 2025Updated 4 months ago
- ☆15May 22, 2025Updated 11 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆22Dec 16, 2024Updated last year
- TreeBeST: Tree Building guided by Species Tree☆14Feb 17, 2011Updated 15 years ago
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆11Aug 26, 2024Updated last year
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆11May 7, 2018Updated 7 years ago
- Identification and Validation Robust Prognostic Biomarkers and Signatures in Solid Tumors☆58Apr 1, 2025Updated last year
- Plot CNV data with a genome viewer in R☆15Apr 5, 2017Updated 9 years ago
- ☆12May 16, 2020Updated 5 years ago
- Systematic Cophylogeny Reconciliation Tool under Duplication-Transfer-Loss Model.☆15Sep 27, 2024Updated last year
- Host prediction for phages☆27Nov 6, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- CAVA (Clinical Annotation of VAriants)☆14Sep 28, 2018Updated 7 years ago
- A richly featured desktop platform for data analysis of bioinformatics. Especially, for quick sequence annotation and mutation analysis o…☆34Nov 6, 2024Updated last year
- A collection of perl scripts for NGS analysis☆17Oct 2, 2024Updated last year
- VIRIDIC (Virus Intergenomic Distance Calculator) computes pairwise intergenomic distances/similarities amongst viral genomes.☆20Oct 19, 2023Updated 2 years ago
- ☆18Feb 18, 2021Updated 5 years ago
- microbial bioinformation☆13May 14, 2020Updated 5 years ago
- Local version of the virus identification and analysis web server (tool set)☆107Apr 12, 2026Updated 3 weeks ago
- A Package for Ribosome Profiling Data Analysis☆18Jan 17, 2026Updated 3 months ago
- fastx-utils using klib☆19Sep 1, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆36Sep 20, 2022Updated 3 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- ☆38Dec 6, 2023Updated 2 years ago
- 🦠🧬 Unraveling Viral Genomes from Metagenomes☆10Oct 3, 2025Updated 7 months ago
- Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.☆34Jun 18, 2023Updated 2 years ago
- Interpretation and visualization of microbiome charts☆544Jul 22, 2025Updated 9 months ago
- mesa package for Methylation Enrichment Sequencing Analysis☆15Mar 27, 2026Updated last month
- ☆370Jan 21, 2026Updated 3 months ago
- Make your agents improve themselves. Reflexio is an AI agent self-improvement harness that enables your AI agents to continuously learn f…☆136Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Step-wise assembly of the neonatal virome modulated by breast feeding.☆11Aug 20, 2021Updated 4 years ago
- Identify phenotype-specific k-mers and predict phenotype using sequenced bacterial strains☆21Jan 5, 2026Updated 4 months ago
- An automatic classification tool for PVS1 interpretation of null variants☆46Mar 4, 2024Updated 2 years ago
- ☆15Nov 6, 2019Updated 6 years ago
- A python library for predicting phage lifestyle based on genome sequence☆41Aug 9, 2023Updated 2 years ago
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 5 months ago
- Pan-genome Analysis☆12May 4, 2025Updated last year