Alternatives and similar repositories for pytorch-rgn:

Users that are interested in pytorch-rgn are comparing it to the libraries listed below

• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆53Updated 2 years ago
• baldassarreFe / graphqa
  Protein quality assessment using Graph Convolutional Networks
  ☆28Updated 2 years ago
• psipred / protein-vae
  Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies
  ☆83Updated last year
• Shen-Lab / gcWGAN
  Guided Conditional Wasserstein GAN for De Novo Protein Design
  ☆37Updated 3 years ago
• IBM / fold2seq
  Code for Fold2Seq paper from ICML 2021
  ☆50Updated 2 years ago
• ElwynWang / DeepFragLib
  ☆29Updated 4 years ago
• psipred / DeepCov
  Fully convolutional neural networks for protein residue-residue contact prediction
  ☆44Updated 5 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated 10 months ago
• emmijokinen / mgpfusion
  mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…
  ☆15Updated 6 years ago
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆84Updated 3 years ago
• sirimullalab / DLSCORE
  DLSCORE: A deep learning based scoring function for predicting protein-ligand binding affinity
  ☆49Updated last year
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆39Updated last year
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆49Updated 3 years ago
• j3xugit / RaptorX-Contact
  Deep residual neural network for protein contact/distance prediction developed by Xu group
  ☆78Updated 4 years ago
• fimrie / DeLinker
  ☆38Updated 4 years ago
• egurapha / prot_domain_segmentor
  Semantic Segmentor for Protein Structures.
  ☆11Updated 3 years ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• tommyhuangthu / FASPR
  an ultra-fast and accurate program for deterministic protein sidechain packing
  ☆29Updated 2 months ago
• PointSite / PointSite
  PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms
  ☆54Updated last year
• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆55Updated 3 years ago
• ElofssonLab / PconsC4
  Fast and easy contact prediction.
  ☆38Updated 8 months ago
• drorlab / DIPS
  Database of Interacting Protein Structures (DIPS)
  ☆96Updated last year
• alexarnimueller / LSTM_peptides
  Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
  ☆72Updated last year
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆34Updated 3 years ago
• jhmlam / NucleicNet
  ☆35Updated 2 years ago
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆32Updated 4 years ago
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆48Updated last year
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆40Updated 2 years ago
• FTD007 / PInet
  ☆25Updated 3 years ago
• DS3Lab / RosENet
  ☆36Updated 3 years ago