kbogas / medknowLinks
Medical Relations and Entities Extraction
☆36Updated 2 years ago
Alternatives and similar repositories for medknow
Users that are interested in medknow are comparing it to the libraries listed below
Sorting:
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- A short tutorial to map biomedical free-text into UMLS concepts using MetaMap☆28Updated last year
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 2 months ago
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆31Updated 2 years ago
- An information extraction system for free-text eligibility criteria☆37Updated 6 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 5 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- ☆17Updated 4 years ago
- A near real-time named-entity recognizer☆60Updated last year
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆101Updated 4 years ago
- ☆98Updated 3 years ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 3 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆61Updated 2 years ago
- Medical Similarity Dataset creation from SNOMED☆28Updated 2 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- ☆67Updated 3 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- ☆16Updated 2 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- PubMed PICO Element Detection Dataset☆57Updated 6 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆86Updated 9 months ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago