spyysalo / pubmedLinks
Tools for working with PubMed data.
☆16Updated 4 years ago
Alternatives and similar repositories for pubmed
Users that are interested in pubmed are comparing it to the libraries listed below
Sorting:
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago
- OAQA Biomedical Question Answering (BioASQ) System☆38Updated 8 years ago
- A CRF-biLSTM based Biomedical NER model in Bioinformatics 2018.☆24Updated 6 years ago
- Datasets for Question Answering by Search and Reading☆69Updated 7 years ago
- Pre-training character n-gram embeddings☆22Updated last year
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Updated 6 years ago
- Uncovering divergent linguistic information in word embeddings with lessons for intrinsic and extrinsic evaluation☆63Updated 6 years ago
- Bidirectional Recurrent Neural Network based sequence labeling for Medical Text.☆25Updated 9 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- ☆35Updated 3 years ago
- Question Answering as Global Reasoning over Semantic Abstractions (AAAI-18)☆33Updated 7 years ago
- Converter from UD-trees to BART representation☆36Updated last year
- Abbreviation definition dection library trained on PubMed abstracts☆48Updated 4 years ago
- ☆16Updated 7 years ago
- Representation Learning of Entities and Documents from Knowledge Base Descriptions☆18Updated 6 years ago
- MT/IE: Cross-lingual Open Information Extraction with Neural Sequence-to-Sequence Models☆23Updated 6 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Updated 7 years ago
- Pipelines that combine different modules to perform relation extraction☆9Updated 6 years ago
- Unsupervised domain adaptation method for relation extraction☆18Updated 6 years ago
- Crowdsourced data for open domain relation classification from sentences☆20Updated 6 years ago
- ☆32Updated 6 years ago
- ☆30Updated 6 years ago
- FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.☆35Updated 5 years ago
- Entity Linking in Queries: Efficiency vs. Effectiveness☆18Updated 7 years ago
- Interpretable Models for NLP using PyTorch☆18Updated 7 years ago
- Combining Distant and Direct Supervision for Neural Relation Extraction☆32Updated 5 years ago
- COLING 2018 Tutorial on Multilingual FrameNet: Automatic semantic role labeling for FrameNet☆25Updated 6 years ago
- A curated question answering research dataset of factoid questions☆49Updated 5 years ago