spyysalo / pubmedLinks
Tools for working with PubMed data.
☆16Updated 5 years ago
Alternatives and similar repositories for pubmed
Users that are interested in pubmed are comparing it to the libraries listed below
Sorting:
- Abbreviation definition dection library trained on PubMed abstracts☆50Updated 5 years ago
- Converter from UD-trees to BART representation☆36Updated last year
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- ☆32Updated 6 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- Semantic similarity measures from Babylon Health☆17Updated 3 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- ☆122Updated 7 years ago
- BlackboxNLP 2019: Analyzing and interpreting neural networks for NLP☆18Updated 6 years ago
- ☆20Updated 7 years ago
- Obtaining word embeddings from a WordNet ontology☆50Updated 2 years ago
- Joint sentence classification-Tensorflow☆33Updated 7 years ago
- ☆16Updated 7 years ago
- NLP: Relation extraction with position-aware self-attention transformer☆67Updated 3 years ago
- Uncovering divergent linguistic information in word embeddings with lessons for intrinsic and extrinsic evaluation☆63Updated 7 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated last year
- Getting started with AllenNLP and PyTorch by training a tweet classifier☆66Updated 8 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Updated 6 years ago
- Tools for working with the TREC CAR dataset.☆36Updated 5 months ago
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Updated 7 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- A generic library for crafting adversarial NLP examples - WIP☆41Updated 7 years ago
- Machine reading comprehension on clinical case reports☆150Updated 4 months ago
- Named Entity Recognition for biomedical entities☆49Updated 2 years ago
- ☆77Updated 2 years ago
- A curated question answering research dataset of factoid questions☆49Updated 6 years ago
- OAQA Biomedical Question Answering (BioASQ) System☆37Updated 8 years ago
- Datasets for Question Answering by Search and Reading☆70Updated 7 years ago