typedb / biograknLinks
BioGrakn Knowledge Graph
☆185Updated 5 years ago
Alternatives and similar repositories for biograkn
Users that are interested in biograkn are comparing it to the libraries listed below
Sorting:
- TypeDB Bio: Biomedical Knowledge Graph☆88Updated 8 months ago
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆86Updated last year
- ☆70Updated 3 years ago
- A Python frontend to (Open Biomedical) Ontologies.☆251Updated 3 weeks ago
- INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and datab…☆203Updated last month
- Hetnets in Python (relocated from dhimmel/hetio)☆102Updated 5 months ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 5 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 3 years ago
- KGX is a Python library for exchanging Knowledge Graphs☆138Updated 3 weeks ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆200Updated last year
- ☆130Updated 3 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆158Updated 2 years ago
- Repository for the Human Disease Ontology.☆386Updated this week
- Ontology Tutorial☆73Updated 3 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Updated 2 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Updated 6 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆177Updated 3 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 5 years ago
- Grounding of biomedical named entities with contextual disambiguation☆47Updated 3 weeks ago
- TypeDB-ML is the Machine Learning integrations library for TypeDB☆552Updated 2 years ago
- Community effort to build a Neo4j Knowledge Graph (KG) that links heterogeneous data about COVID-19☆122Updated 3 years ago
- Hetionet: an integrative network of disease☆338Updated 2 years ago
- A Neo4j backed ontology store☆235Updated last year
- Feature learning over RDF data and OWL ontologies☆46Updated 3 years ago
- A near real-time named-entity recognizer☆63Updated 3 weeks ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- python library for working with ontologies and ontology associations☆133Updated 11 months ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- Python library that classifies content from scientific papers with the topics of the Computer Science Ontology (CSO).☆93Updated last week
- TypeDB Driver Example Projects and Tutorials☆86Updated 3 months ago