CrowdTruth / Medical-Relation-Extraction
Crowdsourced ground truth for medical relation extraction.
☆69Updated 6 years ago
Alternatives and similar repositories for Medical-Relation-Extraction:
Users that are interested in Medical-Relation-Extraction are comparing it to the libraries listed below
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆37Updated 9 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 5 years ago
- ☆121Updated 6 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 4 years ago
- Code for neural-el - EMNLP'17☆84Updated 2 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical name…☆37Updated 6 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- Code for AttentionMeSH☆17Updated 6 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 4 years ago
- Unsupervised domain adaptation method for relation extraction☆18Updated 6 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- ☆48Updated last year
- Entity disambiguation evaluation and error analysis tool☆115Updated 2 years ago
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 2 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆41Updated 4 years ago
- Medical Relations and Entities Extraction☆36Updated 2 years ago
- A system for normalizing disorder mentions in biomedical data.☆19Updated 9 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- Conversion from brat-flavored standoff to CoNLL format☆51Updated 4 years ago
- Code for paper "End-to-End Reinforcement Learning for Automatic Taxonomy Induction", ACL 2018☆64Updated 6 years ago
- A CRF-biLSTM based Biomedical NER model in Bioinformatics 2018.☆24Updated 6 years ago
- ☆90Updated 5 years ago
- Machine reading comprehension on clinical case reports☆148Updated 5 years ago
- Accompanying code for our *SEM 2018 @ NAACL 2018 paper "Mixing Context Granularities for Improved Entity Linking on Question Answering Da…☆58Updated 5 years ago
- For icibm paper☆11Updated 8 years ago
- Reproducibility of the TAGME entity linking system☆60Updated 5 years ago
- A Large Scale Alignment of NaturalLanguage with Knowledge Base Triples for Relation Extraction and Natural language Generation☆45Updated 6 years ago
- Tools for working with the S800 corpus☆11Updated 4 years ago