kamerlinlab / cadeeLinks
CADEE: Computer-Aided Directed Evolution of Enzymes
☆18Updated 2 years ago
Alternatives and similar repositories for cadee
Users that are interested in cadee are comparing it to the libraries listed below
Sorting:
- PyDock Tutorial☆35Updated 7 years ago
- An open-source library for the analysis of protein interactions.☆33Updated 4 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆44Updated 3 years ago
- Official repository for the ProteinDJ protein design pipeline☆81Updated 2 weeks ago
- Framework for the rapid modeling glycans and glycoproteins.☆31Updated 2 years ago
- An ultra-high-performance protein-protein docking for heterogeneous supercomputers☆71Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 6 months ago
- Analysis of alphafold and colabfold results☆32Updated 3 weeks ago
- Python implementation of the Ramachandran plot☆53Updated 6 months ago
- GTalign, high-performance protein structure alignment, superposition and search☆52Updated 5 months ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆85Updated 2 months ago
- ☆55Updated 5 months ago
- Analysis of contacts in molecular dynamics trajectories☆45Updated 6 years ago
- Direct coupling analysis software for protein and RNA sequences☆56Updated 6 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆44Updated 7 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆109Updated last month
- Machine learning prediction of enzyme optimum pH☆50Updated 8 months ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆78Updated 9 months ago
- Python package to manage protein structures and their annotations☆45Updated last year
- Calculation of interatomic interactions in molecular structures☆83Updated 4 years ago
- Contact map alignment☆42Updated 4 years ago
- RosettaDesign using PyRosetta☆33Updated 6 years ago
- ☆54Updated last month
- Modelling of Large Protein Complexes☆39Updated 5 months ago
- Machine learning prediction of enzyme optimum pH☆23Updated 8 months ago
- ☆43Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆83Updated 10 months ago
- Efficient manipulation of protein structures in Python☆61Updated 3 months ago
- an integrated tool for molecular docking and virtual screening☆74Updated 7 months ago