Alternatives and similar repositories for cadee

Users that are interested in cadee are comparing it to the libraries listed below

• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆24Updated 2 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆32Updated 6 years ago
• sarisabban / RosettaDesign
  RosettaDesign using PyRosetta
  ☆30Updated 5 years ago
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆27Updated this week
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆36Updated last year
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆27Updated last year
• KosinskiLab / alphafold3x
  Explicit crosslinks in AlphaFold 3
  ☆21Updated 2 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆38Updated 2 weeks ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆84Updated last year
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆66Updated 8 months ago
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆44Updated 4 months ago
• LPDI-EPFL / rstoolbox
  Python Toolbox For Rosetta Silent Files Processing
  ☆16Updated 5 years ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆40Updated 5 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆54Updated last month
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 5 months ago
• lcbc-epfl / metal-site-prediction
  ☆39Updated last year
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆29Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated last month
• lightdock / lightdock-rust
  A Rust implementation of the LightDock macromolecular docking software
  ☆28Updated last year
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 4 months ago
• haddocking / fcc
  Fraction of Common Contacts Clustering Algorithm for Protein Structures
  ☆26Updated 3 years ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆35Updated 2 years ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆41Updated 2 years ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆42Updated last year
• Hoecker-Lab / protlego
  Automated construction of protein chimeras and their analysis.
  ☆14Updated last year
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆51Updated 8 months ago
• LPDI-EPFL / topobuilder
  Parametric Building of de novo Functional Topologies
  ☆44Updated 3 years ago
• tubiana / protocolGromacs
  Automatic gromacs protocol from preparation to production with ligand parametrization through
  ☆68Updated last month