☆43Nov 22, 2024Updated last year
Alternatives and similar repositories for HistoEncoder
Users that are interested in HistoEncoder are comparing it to the libraries listed below
Sorting:
- Official code for the paper "A Good Feature Extractor Is All You Need for Weakly Supervised Pathology Slide Classification"☆18Aug 17, 2024Updated last year
- Preprocessing module for large histological images☆21Jun 16, 2023Updated 2 years ago
- Benchmarking of deep learning and other segmentation methods for H&E images☆11Jul 6, 2023Updated 2 years ago
- Rust bindings for Openslide☆14Mar 8, 2026Updated 2 weeks ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆27Feb 23, 2024Updated 2 years ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆113Feb 22, 2025Updated last year
- C++ whole slide image reader with native python bindings☆33Jan 31, 2026Updated last month
- The code of 《M4: Multi-Proxy Multi-Gate Mixture of Experts Network for Multiple Instance Learning in Histopathology Image Analysis》☆14Mar 31, 2025Updated 11 months ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆514Updated this week
- MGPATH☆14Oct 15, 2025Updated 5 months ago
- List of QuPath scripts for alignment and stain deconvolution of whole-slide histology images☆27Dec 5, 2022Updated 3 years ago
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆16Jan 5, 2024Updated 2 years ago
- Implementation of Semi-Supervised and Semi-Weakly Supervised Teacher/Student Learning approaches☆14Jan 18, 2023Updated 3 years ago
- DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs☆64Nov 29, 2024Updated last year
- C library for reading virtual slide images☆15Aug 4, 2022Updated 3 years ago
- SEGmentation using Graphs with Inexact aNd Incomplete labels☆21Mar 25, 2022Updated 3 years ago
- Virtual Alignment of pathoLogy Image Series☆210Jun 25, 2025Updated 8 months ago
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆20Feb 28, 2026Updated 3 weeks ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆112Nov 8, 2025Updated 4 months ago
- HistoQC is an open-source quality control tool for digital pathology slides☆319Dec 10, 2025Updated 3 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆85Jul 11, 2024Updated last year
- Whole Slide image (WSI) conversion for brightfield histology images☆39Updated this week
- GraphLSurv: A Scalable Survival Prediction Network with Adaptive and Sparse Structure Learning for Histopathological Whole-Slide Images -…☆12Aug 24, 2023Updated 2 years ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆113Oct 15, 2024Updated last year
- ☆73Updated this week
- Code samples, summaries, cheatsheets and other study material for Hadoop MapReduce and Apache Spark☆10Aug 17, 2018Updated 7 years ago
- One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification☆100Nov 27, 2024Updated last year
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆268Dec 23, 2023Updated 2 years ago
- ☆11Mar 25, 2024Updated last year
- This repository includes the code for HiCo (PyTorch version).☆11Sep 24, 2022Updated 3 years ago
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆164Jan 29, 2024Updated 2 years ago
- Repository supporting the paper titled "Interpretable Deep Learning Systems for Multi-Class Segmentation and Classification of Non-Melano…☆11Dec 1, 2020Updated 5 years ago
- Official repository of Benchmarking Self-Supervised Learning on Diverse Pathology Datasets☆95May 23, 2023Updated 2 years ago
- Efficient subtyping of ovarian cancer histopathology whole slide images using active sampling in multiple instance learning☆11Mar 19, 2024Updated 2 years ago
- Vision-Language Pathology Foundation Model - Nature Medicine☆484Mar 26, 2025Updated 11 months ago
- Don't mix, match! Simple utilities for improved registration of Histopathology Whole Slide Images.☆11Oct 11, 2020Updated 5 years ago
- Python modules to work with large multiresolution images.☆219Mar 10, 2026Updated last week
- Source code for "Build a Speech-to-Text App with React Native, Expo, Node.js/Express & Google API | iOS, Android, Web" Tutorial☆15Sep 9, 2024Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆28Dec 3, 2025Updated 3 months ago