jrfaulkner / spmrfLinks
R package for Bayesian nonparametric adaptive smoothing with Stan
☆9Updated 4 years ago
Alternatives and similar repositories for spmrf
Users that are interested in spmrf are comparing it to the libraries listed below
Sorting:
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- An R package for Bayes Linear emulation and history matching.☆16Updated 4 months ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆17Updated last year
- ☆10Updated 9 months ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17Updated last year
- Infectious disease model library and utilities☆14Updated 2 years ago
- An R package for the analysis of infectious disease transmission data☆10Updated 3 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Updated last year
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Updated 10 months ago
- Presentation at the Joint Statistical Meetings 2021☆12Updated 3 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Updated 2 years ago
- Monte-Carlo State Space Models☆19Updated last year
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Covid-19 epidemiology - data and analysis☆11Updated last year
- Create Contact Matrices from Population Data☆20Updated 2 months ago
- Some code for monkeypox☆10Updated 2 years ago
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆15Updated 6 years ago
- Workshop on hhh4 and the endemic-epidemic framework☆17Updated 2 years ago
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Updated last month
- Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing☆8Updated 4 years ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Updated 3 years ago
- Repository to the R package nowcaster, nowcasting with INLA☆21Updated this week
- R package for estimating excess deaths from daily count data☆20Updated 3 months ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Updated 6 months ago
- Survival modelling via ODEs☆10Updated 3 months ago
- ☆17Updated 4 years ago
- ☆27Updated 4 years ago
- ☆15Updated 4 years ago
- Data and statistical models for biomarker shedding.☆14Updated this week