An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.
☆23Mar 21, 2026Updated last week
Alternatives and similar repositories for EpiSewer
Users that are interested in EpiSewer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Sep 30, 2025Updated 6 months ago
- An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …☆28Mar 9, 2026Updated 3 weeks ago
- ☆23Jun 6, 2025Updated 9 months ago
- A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…☆62Mar 9, 2026Updated 3 weeks ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 5 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Dec 9, 2023Updated 2 years ago
- Data repository for NWSS☆20Feb 18, 2026Updated last month
- Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"☆13May 18, 2022Updated 3 years ago
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11Apr 8, 2025Updated 11 months ago
- US RSV Forecast Hub☆12Mar 20, 2026Updated last week
- An R package for Bayes Linear emulation and history matching.☆18Dec 1, 2025Updated 3 months ago
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆21Updated this week
- Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub☆51Updated this week
- Course on nowcasting and forecasting of infectious disease dynamics☆23Mar 2, 2026Updated 3 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.☆16Mar 23, 2026Updated last week
- Estimate epidemiological delay distributions with brms☆15Mar 2, 2026Updated 3 weeks ago
- Repository to the R package nowcaster, nowcasting with INLA☆23Sep 20, 2025Updated 6 months ago
- Easily combine predictions from multiple Bayesian models using techniques including (pseudo) Bayesian model averaging, hierarchical stack…☆37Dec 19, 2025Updated 3 months ago
- R package for real-time Rt estimation with penalized splines☆15Jan 12, 2026Updated 2 months ago
- Gaussian processes on graphs and lattices in Stan.☆19Mar 17, 2025Updated last year
- Utilities for Scoring and Assessing Predictions☆61Mar 18, 2026Updated last week
- Create Contact Matrices from Population Data☆21Feb 24, 2026Updated last month
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Aug 14, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- R code to replicate analyses in Clark et al 2025 (Beyond single-species models: leveraging multispecies forecasts to navigate the dynamic…☆14Feb 19, 2025Updated last year
- Short course on parametric survival analysis☆15Nov 22, 2024Updated last year
- Analysis of COVID-19 transmission using cluster size distribution☆11Jun 14, 2022Updated 3 years ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Feb 3, 2021Updated 5 years ago
- Conformal Bayes with importance sampling☆23Oct 25, 2021Updated 4 years ago
- Tools for basic signal processing in epidemiology☆12Updated this week
- Simulate infectious disease transmission with contact tracing☆17Mar 23, 2026Updated last week
- Additional censored event tools for Distributions.jl☆14Mar 23, 2026Updated last week
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Analysing epidemic trends using AutoML approaches.☆19Apr 23, 2021Updated 4 years ago
- Flu Scenario Modeling Hub☆12Apr 22, 2025Updated 11 months ago
- Workshop on hhh4 and the endemic-epidemic framework☆19Oct 13, 2022Updated 3 years ago
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆17Oct 31, 2024Updated last year
- Tools for constructing and plotting Markov Random Fields in R for graphical data☆24Updated this week
- Tools for building predictive models in epidemiology.☆17Sep 19, 2025Updated 6 months ago
- ☆32Mar 23, 2026Updated last week