Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"
☆13May 18, 2022Updated 3 years ago
Alternatives and similar repositories for StanCon2020
Users that are interested in StanCon2020 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 6 months ago
- ☆10Sep 30, 2025Updated 7 months ago
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11Apr 8, 2025Updated last year
- R scripts for custom brms families☆14Jul 12, 2024Updated last year
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆24Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R code to replicate analyses in Clark et al 2025 (Beyond single-species models: leveraging multispecies forecasts to navigate the dynamic…☆15Feb 19, 2025Updated last year
- Short course on parametric survival analysis☆15Apr 13, 2026Updated 3 weeks ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Jun 14, 2022Updated 3 years ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Feb 3, 2021Updated 5 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Dec 9, 2023Updated 2 years ago
- Workshop on hhh4 and the endemic-epidemic framework☆19Oct 13, 2022Updated 3 years ago
- Examples on INLA within MCMC☆12May 15, 2017Updated 8 years ago
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆17Oct 31, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An R package for Bayes Linear emulation and history matching.☆18Dec 1, 2025Updated 5 months ago
- Average marginal estimates for Bayesian models fit with the brms package☆19Updated this week
- ☆57Aug 15, 2022Updated 3 years ago
- ☆15Jan 10, 2021Updated 5 years ago
- Course on nowcasting and forecasting of infectious disease dynamics☆23Updated this week
- Influpaint : Inpainting denoising diffusion probabilistic models for infectious disease (such as influenza) forecasting☆20Apr 27, 2026Updated last week
- The official implementation of Non-separable Spatio-temporal Graph Kernels via SPDEs.☆16Jun 2, 2022Updated 3 years ago
- ☆30Apr 2, 2026Updated last month
- Compile Stan models to WebAssembly.☆15May 14, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆10Feb 9, 2026Updated 2 months ago
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆21Sep 1, 2025Updated 8 months ago
- Tools for automatically generating local sensitivity measures in Stan.☆38Dec 2, 2020Updated 5 years ago
- Monitor MCMC runs in the browser☆37Feb 8, 2024Updated 2 years ago
- Tools for evolutionary forecasting☆14Feb 9, 2026Updated 2 months ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Nov 10, 2023Updated 2 years ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17May 9, 2024Updated last year
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆21Apr 28, 2026Updated last week
- ☆44Apr 13, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Create Contact Matrices from Population Data☆21Feb 24, 2026Updated 2 months ago
- Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.☆13Aug 11, 2022Updated 3 years ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Aug 31, 2022Updated 3 years ago
- ☆13Apr 13, 2026Updated 3 weeks ago
- ☆21Updated this week
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Nov 11, 2025Updated 5 months ago
- Gaussian processes on graphs and lattices in Stan.☆19Mar 17, 2025Updated last year