berenslab / contrastive-neLinks
Contrastive neighbor embeddings
☆57Updated last month
Alternatives and similar repositories for contrastive-ne
Users that are interested in contrastive-ne are comparing it to the libraries listed below
Sorting:
- ☆33Updated 6 months ago
- Parametric UMAP embeddings for representation and semisupervised learning. From the paper "Parametric UMAP: learning embeddings with deep…☆152Updated 4 years ago
- Code corresponding to the paper Diffusion Earth Mover's Distance and Distribution Embeddings☆38Updated last year
- An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.☆76Updated 2 months ago
- The need to understand cell developmental processes has spawned a plethora of computational methods for discovering hierarchies from scRN…☆150Updated 4 years ago
- A Python package for intrinsic dimension estimation☆94Updated 2 months ago
- Hyperbolic PCA via Horospherical Projections☆74Updated 2 years ago
- Latent spaces for single cells☆21Updated 2 years ago
- Unsupervised visualization of image datasets using contrastive learning☆116Updated 6 months ago
- TorchDR - PyTorch Dimensionality Reduction☆174Updated 3 weeks ago
- Code accompanying paper "Set Norm and Equivariant Skip Connections: Putting the Deep in Deep Sets."☆29Updated 3 years ago
- GPU-Parallelized UMAP☆52Updated 6 years ago
- Exploring the space of drug combinations to discover synergistic drugs using Active Learning☆24Updated last year
- Tools for building and manipulating graphs in Python☆45Updated last month
- ☆23Updated 3 years ago
- ☆28Updated 3 years ago
- Code accompanying paper: Meta-Learning to Improve Pre-Training☆37Updated 4 years ago
- Explaining dimensionality results using SHAP values☆55Updated 10 months ago
- Uniform Manifold Approximation with Two-phase Optimization (IEEE VIS 2022 short)☆112Updated 3 months ago
- Systematically learn and evaluate manifolds from high-dimensional data☆104Updated last month
- Deep Graph Mapper: Seeing Graphs through the Neural Lens☆58Updated 2 years ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Updated 3 years ago
- The starter repository for submissions to the GeneDisco challenge for optimized experimental design in genetic perturbation experiments.☆24Updated 3 years ago
- NeurIPS 2022: Tree Mover’s Distance: Bridging Graph Metrics and Stability of Graph Neural Networks☆37Updated 2 years ago
- Pytorch implementation of VAEs for heterogeneous likelihoods.☆43Updated 3 years ago
- PyTorch implementation of BasisVAE: Translation-invariant feature-level clustering with Variational Autoencoders☆42Updated 5 years ago
- A temporary repository hosting a pomegranate re-write using PyTorch as the backend.☆73Updated 2 years ago
- CO-Optimal Transport☆42Updated 5 years ago
- Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)☆73Updated 2 years ago
- Differential Robust PCA☆13Updated 3 years ago