YiyuHong / ck_virtual_staining_paperLinks
transform H&E image into CK image using GAN (virtual staining)
☆12Updated 4 years ago
Alternatives and similar repositories for ck_virtual_staining_paper
Users that are interested in ck_virtual_staining_paper are comparing it to the libraries listed below
Sorting:
- A pan-cancer platform for mutation prediction from routine histology☆69Updated 4 years ago
- ☆24Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- version 1 scripts for CODA☆59Updated last year
- The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell …☆19Updated 7 months ago
- QuPath extension for Segment Anything Model (SAM)☆125Updated 4 months ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆32Updated 10 months ago
- A Python library for deep learning on whole-slide images☆53Updated 4 years ago
- Coincides with blogpost for using geojson and shapely☆33Updated 5 years ago
- FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytopla…☆30Updated 4 years ago
- multimodal whole slide image registration in a graph structure☆96Updated last year
- Scripts capable of re-creating figures from Van Valen Lab publications☆18Updated 3 years ago
- Scripts for data processing☆49Updated last year
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆52Updated last year
- Train a model to predict gene expression from histology slides.☆110Updated 3 years ago
- QuPath extension to run StarDist nucleus detection☆47Updated 5 months ago
- Segment Anything for Histopathology☆53Updated 2 months ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆66Updated last week
- Automated Detection of Tumor Regions from H&E-stained Whole Slide Images Using Fully Convolutional Neural Networks☆42Updated 2 years ago
- CODEX data processing code☆12Updated 5 months ago
- Trained only with subject-level labels, NaroNet discovers phenotypes, neighborhoods, and areas with the highest influence when classifyin…☆19Updated last year
- ☆16Updated 2 years ago
- ☆34Updated 2 years ago
- Color Deconvolution for quantification of histological staining☆12Updated 6 years ago
- Codebase for "A Foundation Model for Cell Segmentation"☆116Updated last month
- Piecewise alignment for layers of mosaics☆29Updated 3 months ago
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆228Updated this week
- An introduction to deepcell and deep learning☆155Updated last year
- ☆31Updated 4 years ago
- Deep Learning-based Frozen Section to FFPE Translation☆66Updated last year