Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer
☆19Aug 18, 2023Updated 2 years ago
Alternatives and similar repositories for tailseeker
Users that are interested in tailseeker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation of hotspot2 by Eric Rynes☆18May 11, 2023Updated 2 years ago
- An R package for finding non-adenosine residues in poly(A) tails of ONT direct RNA sequencing reads☆14Updated this week
- ☆19May 13, 2023Updated 2 years ago
- A versatile sequenced read processor for nanopore direct RNA sequencing☆82May 24, 2020Updated 5 years ago
- Sends alerts to a Slack/Discord channel or an email for potentially interesting new articles selected from RSS feeds.☆57Dec 11, 2025Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36May 2, 2023Updated 3 years ago
- ☆20Jun 8, 2023Updated 2 years ago
- Skip the peaks and expose RNA-binding in CLIP data☆10Apr 29, 2026Updated last week
- ☆11Sep 24, 2020Updated 5 years ago
- Species Level Identification of Microbes from Metagenomes☆27Apr 30, 2019Updated 7 years ago
- Collate data from Globus Search for easy discovery and transfer☆15Dec 1, 2025Updated 5 months ago
- Code and analysis pipeline for NASC-seq.☆11Jun 14, 2022Updated 3 years ago
- Adds bulk image import from Google Drive to the Wagtail Admin☆11Mar 5, 2023Updated 3 years ago
- Python Github☆16Apr 21, 2014Updated 12 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Chromatin domains bursting with flavor☆12Dec 29, 2019Updated 6 years ago
- ☆14Mar 18, 2016Updated 10 years ago
- mLDM: a new hierarchical Bayesian statistical model for sparse microbial association discovery☆11Oct 18, 2016Updated 9 years ago
- Codes and results from ONT dRNA benchmarking☆11Nov 28, 2023Updated 2 years ago
- Nanopore basecalling and consensus decoding☆46Jul 22, 2022Updated 3 years ago
- Best practices for readable, sharable, and verifiable R code☆18Mar 26, 2019Updated 7 years ago
- development of network co-localization tool☆16Mar 2, 2026Updated 2 months ago
- Interpretable model of sub-cellular RNA localization.☆12Dec 19, 2022Updated 3 years ago
- R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions☆13Jun 25, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Jun 30, 2023Updated 2 years ago
- Metro navigation and accessibility☆11Feb 7, 2018Updated 8 years ago
- ☆13Apr 16, 2026Updated 3 weeks ago
- Fork of the canopy clustering algorithm of Nielsen et al.☆11Sep 9, 2016Updated 9 years ago
- Supplemental code for "the architecture of SARS-CoV-2 transcriptome" paper☆101Apr 25, 2020Updated 6 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆26Dec 11, 2017Updated 8 years ago
- Specifications for PacBio® native file formats☆31Nov 19, 2024Updated last year
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- ☆12Oct 3, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆13Mar 12, 2026Updated last month
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆11Sep 26, 2024Updated last year
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- ☆15Aug 22, 2023Updated 2 years ago
- Python package to interactively annotate histological images within a jupyter notebook☆18Oct 20, 2025Updated 6 months ago
- BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding☆14Aug 27, 2025Updated 8 months ago
- Rapid Mapping-based Isoform Quantification from RNA-Seq Reads☆127Jun 9, 2022Updated 3 years ago