Alternatives and similar repositories for HNSCC_scRNA

Users that are interested in HNSCC_scRNA are comparing it to the libraries listed below

• Sijin-ZhangLab / PanMyeloid
  ☆108Updated 5 years ago
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆85Updated last year
• Coolgenome / TCM
  Codes used in pan-T cell analysis
  ☆63Updated 2 years ago
• chuiqin / irGSEA
  The integration of single cell rank-based gene set enrichment analysis
  ☆136Updated 3 months ago
• TangFei965 / pan-NK
  These are scripts for pan-cacner NK cells analyses.
  ☆72Updated 2 years ago
• Lan-lab / sc-GC
  ☆31Updated 3 years ago
• youqiongye / CRC_scRNAseq
  ☆47Updated 3 years ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆52Updated 4 years ago
• yqq-chen / CRC_ICB
  ☆32Updated last year
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆69Updated 2 years ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆49Updated 4 months ago
• aliceygao / pan-Fibroblast
  ☆50Updated last year
• ShellyCoder / cellcall
  inferring cell-cell communication from scRNA-seq of ligand-receptor
  ☆84Updated 2 years ago
• tiroshlab / 3ca
  Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".
  ☆127Updated last year
• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆110Updated 6 months ago
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆40Updated last year
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆79Updated 11 months ago
• SiyuanHuang1 / cpplot
  Visualize the results of cell-cell communication analysis
  ☆23Updated 2 years ago
• ma-jq / B
  ☆28Updated last year
• yuyang3 / pan-B
  These are scripts for pan-cacner B cells analyses.
  ☆54Updated last year
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆74Updated 5 years ago
• Junjie-Hu / NSCLC-immunotherapy
  ☆25Updated last year
• ChanLab-UTSW / BreastCancer_Integrated
  ☆31Updated 8 months ago
• wu-yc / scMetabolism
  Quantifying metabolism activity at the single-cell resolution
  ☆143Updated 3 months ago
• Swarbricklab-code / BrCa_cell_atlas
  Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".
  ☆119Updated last year
• califano-lab / PISCES
  R package for Protein activity analysis of single-cell RNAseq.
  ☆84Updated 2 years ago
• zhengrongbin / MEBOCOST
  A python-based package and software to predict metabolite mediated cell-cell communications by single-cell RNA-seq data
  ☆79Updated 3 months ago
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆49Updated last year
• naomihabiblab / BEYOND_DLPFC
  Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease
  ☆61Updated 10 months ago
• BostonGene / MFP
  Mollecular Functional Portraits
  ☆43Updated last year