Alternatives and similar repositories for HNSCC_scRNA

Users that are interested in HNSCC_scRNA are comparing it to the libraries listed below

• youqiongye / CRC_scRNAseq
  ☆45Updated 3 years ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆49Updated 3 years ago
• bio-Pixel / panVC
  ☆50Updated last year
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆83Updated 8 months ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆78Updated 7 months ago
• Sijin-ZhangLab / PanMyeloid
  ☆104Updated 4 years ago
• yuyang3 / pan-B
  These are scripts for pan-cacner B cells analyses.
  ☆51Updated 11 months ago
• meta-cancer / scPLC
  Codes for the scPLC project
  ☆65Updated 2 years ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆44Updated 7 months ago
• TangFei965 / pan-NK
  These are scripts for pan-cacner NK cells analyses.
  ☆68Updated last year
• Lan-lab / sc-GC
  ☆30Updated 2 years ago
• aliceygao / pan-Fibroblast
  ☆43Updated 10 months ago
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆46Updated last year
• yqq-chen / CRC_ICB
  ☆31Updated last year
• ma-jq / B
  ☆24Updated last year
• ShellyCoder / cellcall
  inferring cell-cell communication from scRNA-seq of ligand-receptor
  ☆82Updated last year
• compbioNJU / scPDAC
  R code used to analyze single cell PDAC data
  ☆37Updated 11 months ago
• YutingPKU / PaperWork-scRNA-GSE111527-mouseSVZ
  Reanalyze of GSE111527 scRNA-seq data
  ☆20Updated 5 years ago
• JarningGau / ProjectSVR
  A package for reference mapping and nice visualization
  ☆21Updated last year
• tiroshlab / 3ca
  Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".
  ☆116Updated 9 months ago
• Core-Bioinformatics / MASLD-NASH
  scripts associated with NAFLD-NASH project
  ☆21Updated last year
• chuiqin / irGSEA
  The integration of single cell rank-based gene set enrichment analysis
  ☆124Updated 11 months ago
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆73Updated 5 years ago
• JarningGau / GeneCooc
  ☆11Updated 5 months ago
• Coolgenome / TCM
  Codes used in pan-T cell analysis
  ☆59Updated 2 years ago
• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆105Updated last month
• Chuxj / CRC-atlas
  ☆27Updated last year
• ostunilab / PDAC_Nature_2023
  ☆19Updated last year
• Teichlab / cellhint
  A tool for semi-automatic cell type harmonization and integration
  ☆107Updated 2 months ago
• chloelulu / scMayoMap
  ☆22Updated last year