Alternatives and similar repositories for workshops_UW_Seattle:

Users that are interested in workshops_UW_Seattle are comparing it to the libraries listed below

• kevinblighe / CorLevelPlot
  Visualise correlation results and test significancies of these
  ☆23Updated 5 years ago
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆62Updated 3 months ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆74Updated this week
• thelovelab / rnaseqGene
  RNA-seq workflow: exploratory analysis and differential expression
  ☆76Updated last year
• hansenlab / minfi
  Devel repository for minfi
  ☆60Updated 11 months ago
• jokergoo / circlize_book
  Documentation for circlize package
  ☆40Updated last year
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆87Updated 2 years ago
• stemangiola / tidyseurat
  Seurat meets tidyverse. The best of both worlds.
  ☆160Updated 9 months ago
• waldronlab / MultiAssayWorkshop
  Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment
  ☆20Updated last year
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆171Updated 2 weeks ago
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆75Updated 5 years ago
• kevinblighe / scDataviz
  scDataviz: single cell dataviz and downstream analyses
  ☆63Updated 3 years ago
• praneet1988 / CSBB-Shiny
  Computational Suite for Bioinformaticians and Biologists (CSBB) is a RShiny application developed with an intention to empower researcher…
  ☆36Updated 2 years ago
• YuLab-SMU / aplot
  Decorate a plot with associated information
  ☆104Updated last month
• ropensci / UCSCXenaTools
  An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…
  ☆107Updated 5 months ago
• markrobinsonuzh / cytofWorkflow
  ☆16Updated last year
• Shians / Glimma
  Glimma R package
  ☆50Updated 7 months ago
• hbctraining / versioning_data_scripts
  GitKraken lesson (forked from HBS-RCS)
  ☆9Updated 3 years ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆45Updated last week
• Bioconductor / OrchestratingSingleCellAnalysis-release
  An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
  ☆36Updated 2 years ago
• Bioconductor / CSAMA
  Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
  ☆93Updated 10 months ago
• hbctraining / publication_perfect
  Six hour hands-on to creating publication-quality plots in R
  ☆35Updated last year
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆71Updated this week
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆58Updated 5 months ago
• kordastilab / ImmunoCluster
  ☆27Updated 3 years ago
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆119Updated 4 years ago
• MangiolaLaboratory / sccomp
  Mixed-effect model to test differences in cell type proportions from single-cell data, in R
  ☆101Updated 2 weeks ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated last week
• mikelove / preNivolumabOnNivolumab
  EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
  ☆56Updated last year