Alternatives and similar repositories for cloud-genomics:

Users that are interested in cloud-genomics are comparing it to the libraries listed below

• datacarpentry / genomics-r-intro
  Intro to R and RStudio for Genomics
  ☆28Updated this week
• datacarpentry / organization-genomics
  Project Organization and Management for Genomics
  ☆24Updated last month
• datacarpentry / genomics-workshop
  Genomics Workshop Overview
  ☆46Updated this week
• datacarpentry / wrangling-genomics
  Data Wrangling and Processing for Genomics
  ☆72Updated last month
• datacarpentry / shell-genomics
  Introduction to the Command Line for Genomics
  ☆65Updated last week
• widdowquinn / ten_great_papers
  Ten great papers for wet lab biologists starting out in computational biology
  ☆50Updated 5 years ago
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• SchlossLab / schtools
  Schloss Lab Tools for Reproducible Microbiome Research 💩
  ☆30Updated last year
• ctb / 2019-snakemake-ucdavis
  Intro to workflows for efficient automated data analysis, using snakemake.
  ☆32Updated 5 years ago
• nextflow-io / rmghc-2018
  Nextflow Workshop at Rocky Mountain Genomics HackCon 2018
  ☆10Updated 6 years ago
• datacarpentry / R-genomics
  Lesson on data analysis and visualization in R for genomics
  ☆41Updated 5 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆69Updated last year
• pnnl / hundo
  Snakemake-based amplicon processing protocol for 16S and ITS sequences.
  ☆14Updated 10 months ago
• microbiome / mia
  Microbiome analysis
  ☆51Updated this week
• vallenderlab / MicrobiomeR
  A comprehensive and customizable R package for microbiome analysis.
  ☆21Updated 2 years ago
• nextgenusfs / amptk
  AMPtk: Amplicon ToolKit for NGS data (formally UFITS)
  ☆38Updated last year
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆21Updated 4 years ago
• mblstamps / stamps2018
  STAMPS 2018 course
  ☆16Updated 6 years ago
• tmbuza / iMAP
  iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline
  ☆13Updated 8 months ago
• ArtPoon / BioID
  Source files for online resources of Bioinformatics of Infectious Diseases course
  ☆21Updated 4 years ago
• NIH-HPC / snakemake-class
  Class materials for the NIH HPC snakemake class
  ☆16Updated 3 months ago
• arunsethuraman / biomi609spring2022
  This repository contains curricular material, lecture notes, labs, assignments, exams, code, solutions from the Spring 2022 version of BI…
  ☆12Updated 2 years ago
• kyclark / bioinformatics_primer
  Bioinformatics with Unix, bash, Make, Python, and parallel
  ☆21Updated 4 years ago
• carpentries-incubator / bioc-project
  Introduction to the Bioconductor project
  ☆18Updated this week
• wejlab / animalcules
  R shiny app for interactive microbiome analysis
  ☆55Updated 11 months ago
• spholmes / F1000_workflow
  ☆43Updated 7 years ago
• crazyhottommy / scripts-general-use
  ☆16Updated 7 years ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 2 months ago
• edamame-course / 2016-tutorials
  repo for 2016 EDAMAME tutorials
  ☆11Updated 8 years ago
• krisrs1128 / multitable_review
  Code to accompany "Multitable Methods for Microbiome Data Integration"
  ☆9Updated 5 years ago