hbc / tutorialsLinks
This repo contains tutorials for different NGS analysis methods
☆13Updated 4 years ago
Alternatives and similar repositories for tutorials
Users that are interested in tutorials are comparing it to the libraries listed below
Sorting:
- R package for bcbio RNA-seq analysis.☆63Updated last year
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- ☆75Updated 2 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆37Updated 7 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆96Updated last week
- snakemake workflow for post-processing scATACseq data☆22Updated 5 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- Reference transcriptome indices build from kallisto for popular organisms☆45Updated 2 years ago
- ☆42Updated 3 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 3 weeks ago
- An R interface to the MEME Suite☆54Updated 3 weeks ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated 3 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 5 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- RNA editing quantification in deep transcriptome data☆16Updated 6 months ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆32Updated 10 months ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 7 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆73Updated last year
- collection of notebooks with different cytoscape workflows☆50Updated 2 years ago
- Junction Based Analysis of Splicing Events for RNA-Seq☆34Updated 4 months ago
- Workshop • Analysis of RNA-seq data☆37Updated last year
- Pipeline for processing inDrops sequencing data☆76Updated 7 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Updated 5 years ago
- ATAC-seq lab for BIOINF545☆24Updated 11 months ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- ☆33Updated 3 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72Updated last year
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆62Updated 5 years ago