In-progress projects at Harvard School of Public Health Bioinformatics Core
☆42Jul 24, 2018Updated 7 years ago
Alternatives and similar repositories for projects
Users that are interested in projects are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A small python program to simulate a real-time Nanopore sequencing run based on a previous experiment.☆18Apr 21, 2018Updated 8 years ago
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Jul 29, 2019Updated 6 years ago
- Web application for clinical pharmacogenomic interpretation☆10Mar 3, 2017Updated 9 years ago
- Grid Engine on Compute Engine provides a shell script to manage a Compute Engine cluster along with instructions on how to install and c…☆22Jan 8, 2018Updated 8 years ago
- Manage Files Across Sessions☆14Apr 29, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- ☆11Jun 23, 2017Updated 8 years ago
- Tutorial for "Advances in machine learning for molecules" (for Summer School for Machine Learning in Bioinformatics, https://cs.hse.ru/ss…☆20Aug 26, 2020Updated 5 years ago
- A collection of well-known bioinformatics programs.☆25Apr 24, 2015Updated 11 years ago
- Deep learning to solve RNA design puzzles☆20Feb 4, 2025Updated last year
- Define regions in the genome☆33Mar 3, 2022Updated 4 years ago
- Material for the 2017 May Institute☆13Jun 25, 2017Updated 8 years ago
- Guide to transcriptome assembly & analysis☆21Apr 12, 2017Updated 9 years ago
- ☆46Nov 18, 2019Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆21May 24, 2021Updated 5 years ago
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Jul 21, 2019Updated 6 years ago
- R package that makes linux environment modules available from R☆11Jan 13, 2023Updated 3 years ago
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Oct 9, 2019Updated 6 years ago
- A Visualized Shiny App to Evaluate Drug-Drug Interaction☆12Sep 15, 2015Updated 10 years ago
- This is a repo for the Machine Learning Immunogenicity Team in the August 2016 NCBI Hackathon☆25Oct 28, 2016Updated 9 years ago
- Please report only issues that concern the rendering of the official TYPO3 docs here. For help and support on TYPO3, please see: https:/…☆11Jan 21, 2020Updated 6 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆12Jul 8, 2021Updated 4 years ago
- python script to programmatically enrich your data using Enrichr API☆12Jul 5, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- variation discovery using long range information in linked-reads☆15Oct 5, 2021Updated 4 years ago
- ☆18Mar 19, 2026Updated 2 months ago
- Dockerised and simplified version of SeqWare-CGP-SomaticCore☆14Mar 5, 2021Updated 5 years ago
- Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data☆43Jul 31, 2025Updated 10 months ago
- Scalable genomic analysis pipelines, written in WDL☆12Jun 2, 2026Updated last week
- Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…☆28Jun 13, 2025Updated last year
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆17Nov 20, 2018Updated 7 years ago
- Examples for the Google Genomics Pipelines API.☆50Dec 15, 2017Updated 8 years ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆66Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Software for detecting transposable element insertions from next-generation sequencing data☆14Mar 12, 2021Updated 5 years ago
- ☆11Sep 7, 2023Updated 2 years ago
- This is an example of OAuth 1 Server.☆16Feb 10, 2018Updated 8 years ago
- Demo dashboard for Shiny, shows streaming CRAN log data☆12Nov 17, 2015Updated 10 years ago
- A general-purpose validator generator that uses RFC2119-style assertions as input.☆11Jun 15, 2024Updated last year
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆13May 26, 2026Updated 2 weeks ago
- Source code for the BUDE Alanine Scan web application.☆13May 27, 2025Updated last year