Alternatives and similar repositories for epireview:

Users that are interested in epireview are comparing it to the libraries listed below

• nfidd / nfidd
  Course on nowcasting and forecasting of infectious disease dynamcis
  ☆16Updated this week
• WHO-Collaboratory / collaboratory-epipipeline-community
  ☆14Updated last year
• epiverse-trace / epiparameter
  R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…
  ☆34Updated 2 weeks ago
• WHO-Collaboratory / collaboratory-epiparameter-community
  ☆41Updated last week
• goldingn / covid19_australia_interventions
  Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia
  ☆13Updated last year
• epinowcast / epidist
  Estimate epidemiological delay distributions with brms
  ☆14Updated 2 weeks ago
• reconhub / trendbreaker
  Analysing epidemic trends using AutoML approaches.
  ☆18Updated 3 years ago
• idem-lab / conmat
  Create Contact Matrices from Population Data
  ☆19Updated 3 weeks ago
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 2 years ago
• DenisRustand / INLAjoint
  Joint modeling multivariate longitudinal and time-to-event outcomes with INLA
  ☆19Updated 3 weeks ago
• nicsteyn2 / NZWastewaterModelling
  ☆10Updated 6 months ago
• cran-task-views / Epidemiology
  CRAN Task View: Epidemiology
  ☆22Updated this week
• WorldHealthOrganization / godataR
  R package for easier interactions with the Go.Data API
  ☆13Updated last year
• adrian-lison / EpiSewer
  An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.
  ☆18Updated this week
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆30Updated 6 months ago
• objornstad / ecomodelmarkdowns
  Stand alone markdowns with embedded shiny apps for various eco&epi models
  ☆24Updated last year
• athowes / thesis
  Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)
  ☆16Updated 2 months ago
• calumdavey / RUG
  Repo for the LSHTM R Users Group (RUG)
  ☆9Updated 3 years ago
• epinowcast / epinowcast
  Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model wit…
  ☆61Updated this week
• rosannaclairebarnard / covidm-mtd-Omi
  Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…
  ☆11Updated 2 years ago
• Bisaloo / contactdata
  R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)
  ☆9Updated 3 months ago
• nicholasjclark / portal_VAR
  R code to replicate analyses in Clark et al 2025 (Beyond single-species models: leveraging multispecies forecasts to navigate the dynamic…
  ☆14Updated last month
• aalthous / RCT-Simulations
  Introduction to simulation of randomized controlled trials in R
  ☆25Updated 2 years ago
• BDI-pathogens / EpiLine
  Bayesian Modelling in Epidemiology Case Line Lists
  ☆13Updated 10 months ago
• epiforecasts / inc2prev
  Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
  ☆17Updated last year
• reconhub / linelist
  An R package to import, clean, and store case data
  ☆25Updated 2 years ago
• epiverse-trace / cfr
  R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series
  ☆14Updated last month
• CDCgov / measles-model-chicago-2024
  Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…
  ☆13Updated 5 months ago
• bbolker / bbmisc
  miscellaneous talks and small projects
  ☆12Updated this week
• epiforecasts / ringbp
  Simulate infectious disease transmission with contact tracing
  ☆16Updated 3 weeks ago