monarch-initiative / pyphetoolsLinks
Python Phenopacket Tools
☆15Updated 2 weeks ago
Alternatives and similar repositories for pyphetools
Users that are interested in pyphetools are comparing it to the libraries listed below
Sorting:
- Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.☆28Updated this week
- ☆26Updated 6 years ago
- Repository for the GA4GH phenopacket schema☆90Updated 2 weeks ago
- R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.☆16Updated this week
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆81Updated last month
- phenol: Phenotype ontology library☆24Updated 3 weeks ago
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆29Updated 2 weeks ago
- A simple registry for KGHub projects☆19Updated this week
- Explore the Plant Trait Ontology on the Planteome site.☆47Updated this week
- An information model for representing variant annotations.☆24Updated last week
- Data Ingestion Pipeline for Monarch☆57Updated 2 years ago
- THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build☆17Updated 4 years ago
- OHMI: The Ontology of Host-Microbiome Interactions☆12Updated 3 years ago
- An app and library for building, conversion, and validation of GA4GH Phenopackets.☆16Updated 4 months ago
- Human Phenotype Ontology Workbench☆21Updated 2 years ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆27Updated last year
- The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of …☆20Updated last month
- Ontology for consent codes and data use requirements☆67Updated 3 years ago
- a web application to search and navigate the Human Phenotype Ontology (HPO)☆14Updated last month
- Collect of SO Ontologies☆101Updated 2 months ago
- PATO - the Phenotype And Trait Ontology☆59Updated 2 weeks ago
- ☆20Updated this week
- Build for NCBITaxon☆30Updated last month
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- A software toolkit for the interconversion of standard data models for phenotypic data☆15Updated last month
- OBO Library edition of NCIt☆25Updated 3 months ago
- Ontology Based Profile Matching☆17Updated 3 years ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆26Updated 2 months ago
- Associations of genomic features, drugs and diseases☆48Updated 2 years ago
- A repository for version control of consortium data model(s)☆14Updated 2 weeks ago