POC Nextflow pipeline to run Illumina DRAGEN software
☆14Aug 15, 2025Updated 11 months ago
Alternatives and similar repositories for nf-dragen
Users that are interested in nf-dragen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- finding conserved regions in highly diverse genomes☆16May 25, 2026Updated 2 months ago
- whole genome MLST analysis☆55Jun 17, 2026Updated last month
- ☆18May 19, 2025Updated last year
- ☆11May 14, 2025Updated last year
- This is the command line version of MiFish pipeline. It can also be used with any other eDNA meta-barcoding primers☆22Jul 23, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Collaborative Open Plant Omics☆18Aug 1, 2024Updated last year
- Public repository for the biodata resource inventory performed in 2022.☆11Nov 25, 2025Updated 8 months ago
- ☆24Feb 23, 2023Updated 3 years ago
- Flexible workflow designed for bacterial WGS analyses (annotation, core/pan-genome reconstruction, phylogeny)☆12Aug 6, 2023Updated 2 years ago
- ☆40Sep 14, 2016Updated 9 years ago
- Computational LOINC in OWL.☆18Jul 1, 2026Updated 3 weeks ago
- Examples showing how to configure Nextflow to run with Wave containers provisioning service☆21Apr 16, 2026Updated 3 months ago
- This is the repository for the GA4GH Data Security Work Stream, containing AAI and DSIP.☆25Jul 21, 2026Updated last week
- Liftover VCF files☆19Dec 10, 2016Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Deep learning library for biological sequences. Extension of Fastai and Pytorch.☆39Jul 17, 2026Updated last week
- A collection of scripts to assist in the retrieval of data from the ENA Browser☆101Jul 6, 2026Updated 3 weeks ago
- luigi based workflow for analysising WGS samples collecting from different source. It will auto clustering, annotating gene or species, a…☆10Nov 28, 2023Updated 2 years ago
- Omics: Angular + Rust☆11Jan 20, 2023Updated 3 years ago
- An experimental tool to find approximate max-cuts in a large graph☆10Apr 28, 2021Updated 5 years ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆36Jun 30, 2024Updated 2 years ago
- ☆13Aug 20, 2025Updated 11 months ago
- Consensus assembly and variant calling workflow.☆12May 26, 2015Updated 11 years ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 微信扫码登陆在Django上的实现☆11Jan 14, 2021Updated 5 years ago
- Static website for the PH4AGE alliance☆13Oct 27, 2023Updated 2 years ago
- This repo demonstrates the development of Retrieval Augmented Generation (RAG).☆11May 3, 2025Updated last year
- Portable Crystal binary distributions for Linux on x86_64☆15Mar 22, 2021Updated 5 years ago
- Curated datasets on reported cases of the SARS-CoV-2 Omicron (B.1.1.529) Variant of Concern☆10Jan 25, 2022Updated 4 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- Script for generating PNG preview from asciicast JSON file☆14Apr 13, 2022Updated 4 years ago
- Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning☆14Jun 28, 2026Updated last month
- Web-based User Interface to run WDL bioinformatics workflows using Cromwell server☆13Aug 28, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A simple fastp-MultiQC nextflow pipeline☆12Feb 2, 2023Updated 3 years ago
- Protein orthologous group assignment with deep learning☆30Dec 16, 2025Updated 7 months ago
- A Fine-Mapping pipeline☆22Sep 13, 2019Updated 6 years ago
- BayesTME: A reference-free Bayesian method for analyzing spatial transcriptomics data☆15Apr 29, 2025Updated last year
- A proof of concept daisy-chaining Nextflow workflows☆34Mar 10, 2026Updated 4 months ago
- 🌊 Robust workflows for gathering data about your local ocean.☆14Jul 19, 2023Updated 3 years ago
- ☆12Mar 15, 2024Updated 2 years ago