A Linux Shell Handbook for Bioinformatician
☆51Sep 2, 2026Updated last month
Alternatives and similar repositories for Linux_HandBook_Bioinformatics
Users that are interested in Linux_HandBook_Bioinformatics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- team lander github repo☆10Aug 7, 2021Updated 5 years ago
- ☆20Jun 26, 2025Updated last year
- Scientific Computing in Python, a practical and ultimate tutorials☆14Mar 7, 2023Updated 3 years ago
- A collection of useful functions for bioinformatics data analysis☆26Mar 19, 2026Updated 6 months ago
- Physalia course Machine Learning for Multi-Omics Integration☆21Jun 11, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing da…☆55Feb 18, 2026Updated 7 months ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Jan 20, 2022Updated 4 years ago
- R vignettes/pkgdown for elementary statistics for a summer course☆14May 7, 2026Updated 5 months ago
- An R package built on RMarkdown to create biosketches (e.g. for NIH)☆22Feb 25, 2022Updated 4 years ago
- Assign taxonomy with blast, can be used for qiime☆26Mar 25, 2025Updated last year
- VcfExplorer regroups several programs which principal aims are to map DNA and RNAseq data onto reference genome sequence, perform variant…☆16Apr 15, 2026Updated 5 months ago
- PyCharm Test Project created from Django default tutorial☆13Sep 23, 2015Updated 11 years ago
- ☆24Apr 17, 2025Updated last year
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆30Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An interactive learning resource for next-generation sequencing (NGS) techniques☆34Oct 12, 2018Updated 7 years ago
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15Sep 4, 2026Updated last month
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated last year
- Course material for OPEN & REPRODUCIBLE MICROBIOME DATA ANALYSIS SPRING SCHOOL☆30May 1, 2020Updated 6 years ago
- Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations☆11Sep 18, 2025Updated last year
- Collisional cross-section prediction for modified and multiconformational peptides☆14Aug 26, 2026Updated last month
- Course website for Johns Hopkins BSPH Statistical Computing (Biostatistics 140.776)☆10Oct 1, 2026Updated last week
- This is a Shiny app to fetch users' activity and interact with Rmarkdown (pdf/word) report☆17Apr 22, 2019Updated 7 years ago
- A simple tool for extracting reads from Oxford Nanopore fast5 files☆26Sep 4, 2017Updated 9 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Bioinformatics Workbook repository☆212Jul 30, 2026Updated 2 months ago
- SAveRUNNER (Searching off-lAbel dRUg aNd NEtwoRk) - a network-based approach for drug repurposing☆14Nov 27, 2024Updated last year
- scTriangulate is a Python package to mix-and-match conflicting clustering results in single cell analysis and generate reconciled cluster…☆39Mar 30, 2026Updated 6 months ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Associate pathways + gene ontologies with significant genes.☆10Jun 5, 2023Updated 3 years ago
- Exome/Capture/RNASeq Pipeline Implementation using snakemake☆19Oct 18, 2019Updated 6 years ago
- Open-source Deep Learning Framework for Allosteric Pocket Prediction☆17Jul 31, 2026Updated 2 months ago
- Computational Biology- Spring 2021☆50Nov 1, 2021Updated 4 years ago
- SODAR Core: A Django-based framework for building scientific data management web apps☆13Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆13Sep 30, 2023Updated 3 years ago
- ☆11Feb 14, 2023Updated 3 years ago
- Introductory bioinformatics course☆27Mar 14, 2025Updated last year
- ☆11Aug 18, 2026Updated last month
- R package for proximity-based methods of link prediction.☆12Aug 11, 2025Updated last year
- Constrained episodic reinforcement learning in concave-convex and knapsack settings☆11Oct 3, 2023Updated 3 years ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 6 years ago