Alternatives and similar repositories for sodar-core

Users that are interested in sodar-core are comparing it to the libraries listed below

• iBridges-for-iRODS / iBridges
  A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.
  ☆21Updated 2 weeks ago
• bihealth / sodar-server
  SODAR: System for Omics Data Access and Retrieval
  ☆18Updated 2 weeks ago
• Xomics / FAIRDataCube
  Design and implementation of FAIR Data Cube
  ☆11Updated 6 months ago
• Viant-Metabolomics / Galaxy-M
  Metabolomics Tools for Galaxy
  ☆21Updated 9 years ago
• workflow4metabolomics / tools-metabolomics
  Galaxy tools for metabolomics maintained by Workflow4Metabolomics
  ☆30Updated 3 months ago
• bigbio / sdrf-pipelines
  `sdrf-pipelines` is the official SDRF file validator and converts SDRF to pipeline configuration files
  ☆29Updated last month
• ncats / RaMP-DB
  ☆37Updated 3 weeks ago
• fgcz / rawDiag
  Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package
  ☆37Updated last year
• ISA-tools / isa-api
  ISA tools API
  ☆46Updated 3 weeks ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆55Updated 3 weeks ago
• pcastellanoescuder / FoodBiomarkerOntology
  Food-Biomarker Ontology defines the relationships between foods and their associated metabolites (biomarkers) through a formal ontology
  ☆17Updated 3 years ago
• secimTools / SECIMTools
  A set of metabolomics tools for use in Galaxy
  ☆11Updated 3 years ago
• HUPO-PSI / mzQC
  Reporting and exchange format for mass spectrometry quality control data
  ☆32Updated 2 weeks ago
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆39Updated 2 weeks ago
• HUPO-PSI / mzTab
  mzTab Reporting MS-based Proteomics and Metabolomics Results
  ☆43Updated 9 months ago
• elixir-europe / BioHackathon-projects-2020
  This repository is meant for the participants of the BioHackathon hosted in Barcelona in Nov 2020 to share ideas, create issues, manage p…
  ☆24Updated 3 years ago
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆17Updated 2 weeks ago
• bigbio / proteomics-sample-metadata
  The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets
  ☆98Updated 3 months ago
• USEPA / CompTox-ToxCast-tcpl
  US EPA's Toxicity Forecaster (ToxCast) Pipeline. More information on the ToxCast program available here: https://www.epa.gov/comptox-tool…
  ☆41Updated 2 months ago
• irods / irods_resource_plugin_s3
  S3-compatible storage resource plugin for iRODS
  ☆13Updated last month
• computational-metabolomics / msp2db
  Convert MSP files into a database
  ☆10Updated 4 years ago
• HUPO-PSI / mzML
  Repository for mzML and the corresponding examples
  ☆33Updated last year
• biopragmatics / bioregistry
  📮 An integrative registry of biological databases, ontologies, and nomenclatures.
  ☆138Updated this week
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆30Updated last year
• elixir-europe / rdmkit
  ELIXIR Research Data Management Toolkit - Find the answers to your research data management questions here.
  ☆104Updated last week
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆56Updated 3 weeks ago
• UtrechtUniversity / yoda
  A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.
  ☆54Updated last week
• ahmohamed / lipidr
  Data Mining and Analysis of Lipidomics datasets in R
  ☆31Updated 2 years ago
• galaxyproteomics / tools-galaxyp
  Galaxy Tool Shed repositories maintained and developed by the GalaxyP community
  ☆35Updated 2 weeks ago
• Nextflow4Metabolomics / nextflow4ms-dial
  Nextflow-powered MS-DIAL
  ☆10Updated 11 months ago