kir-mapper is a toolkit for calling SNPs, alleles, and haplotypes for KIR genes from short-read second-generation sequencing (NGS) data.
☆12Aug 13, 2026Updated 2 months ago
Alternatives and similar repositories for kir-mapper
Users that are interested in kir-mapper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Dec 10, 2025Updated 10 months ago
- Supplementary code for the analyses presented in the manuscript: Microglia coordinate intracellular interactions during spinal cord repai…☆12Jul 2, 2024Updated 2 years ago
- A highly precise algorithmic pipeline for accurate mapping of NGS reads from highly homologous regions☆11Oct 31, 2026Updated last week
- Variant Calling for the HPRC2☆20May 26, 2026Updated 5 months ago
- tandemtwister: Tandem repeat genotyping tool☆23Feb 1, 2026Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Repository for code to produce phased 1000 Genomes Project haplotypes called against the CHM13v2 T2T reference genome.☆21Oct 21, 2026Updated 2 weeks ago
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆12Sep 26, 2024Updated 2 years ago
- R package – HLA Genotype Imputation with Attribute Bagging (development version only)☆31Sep 17, 2026Updated last month
- ☆16Dec 3, 2025Updated 11 months ago
- A set of packages to read and write common file formats produced by computational biology software.☆10Jan 21, 2014Updated 12 years ago
- Tools for Measuring Predictor Importance☆19Sep 17, 2026Updated last month
- pangenome alignment, implicit/explicit graph, and variants for human pangenome project release 2☆24Sep 9, 2026Updated last month
- ARG-Needle library for representing and analyzing ancestral recombination graphs (ARGs)☆10Nov 21, 2025Updated 11 months ago
- A script to run HLA typing tools from next generation sequencing data☆11Jan 4, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆37Aug 18, 2025Updated last year
- Workflow for viral analysis guided by reference☆16Updated this week
- A method to locate variation clusters☆11Nov 27, 2025Updated 11 months ago
- A Nextflow workflow for HLA typing using HLA-HD☆15Jul 3, 2024Updated 2 years ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 3 years ago
- A recopilation of nonlinear growth models used in many branches of science☆20Apr 22, 2018Updated 8 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Singularity port of HLA typing based on an input exome BAM file and is currently infers infers alleles for the three major MHC class I (…☆15Jan 15, 2017Updated 9 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Oct 8, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- H2M is a Python pipeline for precise modeling of human variants in the mouse genome.☆15Oct 9, 2026Updated 3 weeks ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Nov 21, 2019Updated 6 years ago
- Immuological gene typing and annotation for genome assembly☆42Mar 13, 2025Updated last year
- ☆10Oct 16, 2026Updated 3 weeks ago
- Genomics workflows for CPG using Hail Batch☆12Sep 8, 2026Updated last month
- A tool for pangenome graph-based phased diploid genome inference.☆10Updated this week
- R package accompanying the second edition of "Chemometrics with R", Springer☆18Sep 2, 2020Updated 6 years ago
- ☆11Feb 14, 2023Updated 3 years ago
- ☆17Mar 7, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Shiny ✨ to Azure App Service demo 🚀☆19Mar 19, 2024Updated 2 years ago
- A tool to annotate inversions from pangenome graph bubbles.☆11Jun 26, 2026Updated 4 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆57Dec 19, 2023Updated 2 years ago
- Ultrafast and powerful eGene identification method☆10Jul 17, 2025Updated last year
- Complete assemblies of non-human primate genomes☆63May 20, 2025Updated last year
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 6 years ago
- Accurate Typing of Diverse Immune-Related Gene Families from Long-Read Sequencing Data. It can handle HLA, KIR, IG, TCR, CYP gene familie…☆41Mar 8, 2026Updated 7 months ago