An interactive course on learning genomics/bioinformatics tasks in Linux.
☆42Mar 21, 2026Updated 3 months ago
Alternatives and similar repositories for learn-genomics-in-linux
Users that are interested in learn-genomics-in-linux are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆18Jun 8, 2026Updated last month
- Workshop • Intro to Bioinformatics using NGS data • 5 days☆17Mar 16, 2026Updated 3 months ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Scripts written for my Bioinformatics-along on YouTube: https://www.youtube.com/playlist?list=PLzfP3sCXUnxEu5S9oXni1zmc1sjYmT1L9☆77Dec 8, 2021Updated 4 years ago
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆10Apr 16, 2025Updated last year
- T-SNE streamlit dimensionality reduction/data visualization tutorial☆12Jun 12, 2024Updated 2 years ago
- Ressources for Boinformatics Trainings☆14Nov 20, 2023Updated 2 years ago
- AMR/VF LGT focused bacterial genomics analysis workflow☆28Feb 19, 2026Updated 4 months ago
- ☆12Nov 23, 2020Updated 5 years ago
- IPython notebooks to teach Genomics and Population Genetics☆21Feb 13, 2017Updated 9 years ago
- Computational Biology Summer Program Hackathon☆14Jun 12, 2026Updated 3 weeks ago
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆19Mar 26, 2026Updated 3 months ago
- An analytics package for single cell data☆22May 18, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆14Apr 4, 2023Updated 3 years ago
- Various scripts for efficient processing of 10k Salmonella genomes☆16Sep 16, 2021Updated 4 years ago
- Quantitative Genetics Tools for Mapping Trait Variation to Mechanisms, Therapeutics, and Interventions - Webinar Series☆29Jul 23, 2023Updated 2 years ago
- This repository contains the answers for coursera 's "Command Line Tools for Genomic Data Science"☆13Aug 6, 2023Updated 2 years ago
- An Amazing Shiny App☆16Sep 9, 2021Updated 4 years ago
- A list of awesome bioinformatics communities☆29Oct 3, 2024Updated last year
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Population analysis PIPEline 🛠🧬☆25Mar 2, 2026Updated 4 months ago
- See https://github.com/LTLA/SingleRBook for the latest version of this content.☆14Jun 21, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- a novel method for unsupervised patient stratification☆10Jan 4, 2026Updated 6 months ago
- The book aims to describe programming good practices and introduce common tools used in software development to guarantee reproducibility…☆15Jan 2, 2023Updated 3 years ago
- A label free quantification tool.☆20Jan 13, 2026Updated 5 months ago
- An exploration of internal reference scaling (IRS) normalization in isobaric tagging proteomics experiments.☆17Aug 6, 2019Updated 6 years ago
- A guide to using the Python scRNA-seq analysis package Scanpy from R☆15Apr 27, 2020Updated 6 years ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 6 years ago
- ☆29Apr 4, 2021Updated 5 years ago
- This is the repository for the single-cell transcriptomics application of the Deep Generative Decoder (DGD), developed by the Krogh group…☆15Aug 8, 2024Updated last year
- Generation and updating of protein families☆22Jun 9, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆21Sep 12, 2025Updated 9 months ago
- Scripts and files for the annual Short Read Analysis Workshop☆14Updated this week
- density growing clustering☆10Dec 2, 2021Updated 4 years ago
- repository of notebooks for cryoEM☆14Mar 12, 2020Updated 6 years ago
- A calm, habit-forming offline journal.☆29Sep 6, 2024Updated last year
- Workshop: Using R/tidyverse to analyze & visualize gapminder/processed transcriptomics data!☆13Sep 12, 2025Updated 9 months ago
- ☆13Mar 16, 2026Updated 3 months ago