An interactive course on learning genomics/bioinformatics tasks in Linux.
☆40Mar 21, 2026Updated last week
Alternatives and similar repositories for learn-genomics-in-linux
Users that are interested in learn-genomics-in-linux are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆18Jan 19, 2026Updated 2 months ago
- Workshop • Intro to Bioinformatics using NGS data • 5 days☆16Mar 16, 2026Updated last week
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Scripts written for my Bioinformatics-along on YouTube: https://www.youtube.com/playlist?list=PLzfP3sCXUnxEu5S9oXni1zmc1sjYmT1L9☆77Dec 8, 2021Updated 4 years ago
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Wastewater Epidemic Model☆14Jun 12, 2024Updated last year
- T-SNE streamlit dimensionality reduction/data visualization tutorial☆12Jun 12, 2024Updated last year
- Ressources for Boinformatics Trainings☆12Nov 20, 2023Updated 2 years ago
- Research pipeline for exploring clinically relevant genomic variants☆16Updated this week
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆17Mar 5, 2026Updated 3 weeks ago
- Computational Biology Summer Program Hackathon☆13Jun 12, 2025Updated 9 months ago
- PHi-C: deciphering Hi-C data into polymer dynamics☆11Aug 12, 2020Updated 5 years ago
- An analytics package for single cell data☆22May 18, 2022Updated 3 years ago
- ☆14Apr 4, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Tutorials contain live coding and script for R programming in Bangla☆16Oct 4, 2019Updated 6 years ago
- Various scripts for efficient processing of 10k Salmonella genomes☆16Sep 16, 2021Updated 4 years ago
- LoD calculator☆24Jul 11, 2019Updated 6 years ago
- Quantitative Genetics Tools for Mapping Trait Variation to Mechanisms, Therapeutics, and Interventions - Webinar Series☆29Jul 23, 2023Updated 2 years ago
- Micro 612 genomics workshop☆38Apr 23, 2021Updated 4 years ago
- An Amazing Shiny App☆16Sep 9, 2021Updated 4 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- Population analysis PIPEline 🛠🧬☆23Mar 2, 2026Updated 3 weeks ago
- See https://github.com/LTLA/SingleRBook for the latest version of this content.☆12Jun 21, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆20Dec 3, 2024Updated last year
- a novel method for unsupervised patient stratification☆10Jan 4, 2026Updated 2 months ago
- The book aims to describe programming good practices and introduce common tools used in software development to guarantee reproducibility…☆15Jan 2, 2023Updated 3 years ago
- A label free quantification tool.☆18Jan 13, 2026Updated 2 months ago
- An exploration of internal reference scaling (IRS) normalization in isobaric tagging proteomics experiments.☆16Aug 6, 2019Updated 6 years ago
- A guide to using the Python scRNA-seq analysis package Scanpy from R☆15Apr 27, 2020Updated 5 years ago
- SOAP-HLA is a flow of sequencing data analysis pipeline to type all of the HLA genes in IMGT/HLA database using capture sequenced data or…☆10Jun 3, 2020Updated 5 years ago
- ☆30Apr 4, 2021Updated 4 years ago
- This is the repository for the single-cell transcriptomics application of the Deep Generative Decoder (DGD), developed by the Krogh group…☆15Aug 8, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Generation and updating of protein families☆23Mar 13, 2026Updated 2 weeks ago
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆20Sep 12, 2025Updated 6 months ago
- Scripts and files for the annual Short Read Analysis Workshop☆12Updated this week
- density growing clustering☆10Dec 2, 2021Updated 4 years ago
- Topsicle utilizes abundance of telomere pattern k-mers to estimate telomere length in long read.☆20Mar 2, 2026Updated 3 weeks ago
- Workshop: Using R/tidyverse to analyze & visualize gapminder/processed transcriptomics data!☆13Sep 12, 2025Updated 6 months ago
- This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools☆36Updated this week