This repository is for cell segmentation benchmark
☆14Sep 17, 2025Updated last year
Alternatives and similar repositories for cs-benchmark
Users that are interested in cs-benchmark are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- World's first Diffusion Model based Visual Language Model for Pathology☆11Jun 29, 2025Updated last year
- A curated and practical guide to foundation models in computational pathology. This repo brings together key architectures, learning tech…☆17Aug 28, 2025Updated last year
- Exploring Unsupervised Cell Recognition with Prior Self-activation Maps (MICCAI 2023)☆13Oct 27, 2023Updated 3 years ago
- R package to prepare data for DeepDEP☆10Aug 24, 2021Updated 5 years ago
- Accelerated CellStitch for 3D labeling of anisotropic image stacks☆15Mar 1, 2026Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Apr 9, 2026Updated 6 months ago
- Official implementation, datasets and trained models of "Masked Image Modeling for Generalizable Organelle Segmentation in Volume EM" (IE…☆11Mar 10, 2026Updated 7 months ago
- A relabeling tool for tiled segmentation with Dask☆18Sep 24, 2024Updated 2 years ago
- ☆17Oct 27, 2026Updated last week
- ☆11Mar 1, 2026Updated 8 months ago
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆26Oct 16, 2026Updated 3 weeks ago
- Lab for quantitative bioimage analysis experiments in Python☆21Oct 7, 2026Updated 3 weeks ago
- An open-source UNet-based pipeline for nuclei segmentation in histopathology images using the PanNuke dataset. It features an interactive…☆11Jan 9, 2025Updated last year
- Agent skill: safely reads your PC specs and recommends the top 3 local AI models (most powerful / best coding / best small+fast) with lin…☆16Jun 24, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆18Dec 7, 2023Updated 2 years ago
- A bidirectional cross-attention and pre-trained general-purpose foundation model-based algorithm to predict super-resolved spatial gene e…☆10Feb 27, 2026Updated 8 months ago
- This repository is for CellBin research group☆37Updated this week
- ☆37Jul 18, 2025Updated last year
- [NeurIPS'24] Free Lunch in Pathology Foundation Model: Task-specific Model Adaptation with Concept-Guided Feature Enhancement - NeurIPS 2…☆16Nov 19, 2024Updated last year
- SoftCTM won 3rd place in the OCELOT 2023 Challenge. Multi-organ H&E-based deep learning model for cell detection, applicable for tumor ce…☆16Oct 22, 2026Updated 2 weeks ago
- ☆13Mar 20, 2024Updated 2 years ago
- ☆19Mar 30, 2025Updated last year
- Frames Extraction With OpenCV and Python☆16Aug 26, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- [ECCV 2024] TTD: Text-Tag Self-Distillation Enhancing Image-Text Alignment in CLIP to Alleviate Single Tag Bias☆12Jul 25, 2026Updated 3 months ago
- A self-supervised learning method with Vision Transformer as backbone network for resolution enhancement in spatial transcriptomics.☆10Aug 25, 2025Updated last year
- [NeurIPS-2023] The PyTorch Implementation of MoSo. The algorithms are based on our paper: "Data Pruning via Moving-one-Sample-out". MoSo …☆11May 21, 2026Updated 5 months ago
- ☆10Mar 10, 2026Updated 7 months ago
- Creating the perfect hike with OSM and NetworkX.☆22Aug 29, 2022Updated 4 years ago
- Research note backup storage that syncs Notion to Git and generates AI summaries☆11Jan 10, 2026Updated 9 months ago
- Qt QML based yolov5 + RGBD camera program☆18Jul 29, 2022Updated 4 years ago
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆42Jan 10, 2025Updated last year
- [IJCAI'23] Prompt Federated Learning for Weather Forecasting: Toward Foundation Models on Meteorological Data.☆14Oct 3, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- AESTETIK: Convolutional autoencoder for learning spot representations from spatial transcriptomics and morphology data☆28Aug 18, 2026Updated 2 months ago
- ☆22Aug 17, 2025Updated last year
- rna2seg☆25May 15, 2025Updated last year
- [PLoS Computational Biology 2025] Domain-Adversarial Masked Autoencoder (SpaDAMA) for cell type deconvolution in spatial transcriptomics …☆12Nov 6, 2025Updated last year
- Deploy Swin Transformer using TorchServe☆29Jul 13, 2021Updated 5 years ago
- Supervised Vector-Quantized Autoencoder☆20Jul 6, 2021Updated 5 years ago
- [NeurIPS 2025] Few-Shot Learning from Gigapixel Images via Hierarchical Vision-Language Alignment and Modeling☆26Aug 5, 2026Updated 3 months ago