kilicogluh / lbd-covidLinks
Drug repurposing for COVID-19 using literature-based discovery
☆28Updated 2 years ago
Alternatives and similar repositories for lbd-covid
Users that are interested in lbd-covid are comparing it to the libraries listed below
Sorting:
- ☆55Updated 4 years ago
- Biomedical Relation Extraction with Knowledge Graph-based Recommendations☆8Updated last year
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆34Updated last month
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆86Updated 10 months ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- Method for drug repurposing from knowledge graphs and literature☆34Updated 4 years ago
- ☆29Updated last year
- COVID-19 Knowledge Graph: a computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology☆44Updated 3 years ago
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆11Updated last year
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆30Updated 4 years ago
- ☆19Updated 5 years ago
- ☆66Updated last year
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 5 years ago
- Simple analyses and tutorials on the COVID-19 Knowledge Graph☆14Updated 5 years ago
- Implementation of Using Drug Descriptions and Molecular Structures for Drug-Drug Interaction Extraction from Literature☆39Updated 4 years ago
- A Knowledge Graph for Relational Learning On Biological Data☆99Updated last year
- ☆10Updated 4 years ago
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆17Updated last week
- ☆63Updated 5 years ago
- Drug-target interaction prediction using deepWalk node embedding algorithm on drugBank☆11Updated 4 years ago
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- 📊 Results from the reproducibility and benchmarking studies presented in "Bringing Light Into the Dark: A Large-scale Evaluation of Know…☆36Updated 3 years ago
- ☆34Updated 4 years ago
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆30Updated 2 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- ☆50Updated 3 years ago
- Disease subnetwork detection with explainable Graph Neural Networks☆23Updated last year
- Improving Inductive Link Prediction Using Hyper-Relational Facts☆14Updated 3 years ago
- ☆56Updated 5 years ago
- Using pretrained language models for biomedical knowledge graph completion.☆47Updated 3 years ago