dportik / Pandas-for-Population-Structure-Barplots
A jupyter notebook tutorial for making high-quality barplot figures from population structure analyses (Admixture, Structure) with Python & Pandas.
☆12Updated 6 months ago
Related projects ⓘ
Alternatives and complementary repositories for Pandas-for-Population-Structure-Barplots
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆30Updated 2 years ago
- spruceup☆20Updated 2 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆35Updated last week
- Assembly by Reduced Complexity (ARC)☆41Updated 8 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆37Updated last week
- ☆21Updated 10 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 4 years ago
- scripts to parse and analyse MCScanX collinearity output☆29Updated 4 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated last year
- PoSeiDon: positive selection detection and recombination analysis pipeline☆35Updated last week
- a broadly applicable tool for automated gene identification and retrieval☆28Updated 4 months ago
- ☆32Updated 3 years ago
- Compute N50/NG50 and auN/auNG☆31Updated last year
- a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies☆59Updated last week
- R package to draw syntenic plots in 3 different styles☆39Updated 11 months ago
- Workshop on Genomics - Genomics Adventure☆33Updated 9 months ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Updated 2 years ago
- Scripts for homology and orthology assessment from genomic sequences.☆19Updated 4 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆30Updated 8 months ago
- genomic alignment similarity search tool☆19Updated 5 months ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 3 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆43Updated 4 years ago
- ☆26Updated 3 years ago
- ☆32Updated 8 months ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆59Updated 4 years ago
- Chromosome-level synteny plotting using orthologous regions☆28Updated last month
- Implementation of ToL genome assembly workflows☆20Updated this week
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆12Updated 2 years ago
- Genome-Genome circle synteny☆23Updated 11 months ago
- Convergent substitution detection tool based on the PCOC model☆29Updated 2 years ago