dnanexus-archive / ReadshiftLinks
Readshift: A method to shift high-quality NGS datasets into noisy datasets
☆0Updated 6 years ago
Alternatives and similar repositories for Readshift
Users that are interested in Readshift are comparing it to the libraries listed below
Sorting:
- Mapping-free variant caller for short-read Illumina data☆19Updated 5 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- Integrated Variant Caller☆17Updated 7 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- ☆37Updated 4 years ago
- sort genomic data☆35Updated 5 years ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- HGVS variant description extractor☆11Updated 4 years ago
- R tools to interact with hap.py output☆15Updated 6 years ago
- Numerical Encoding for Human Genetic Variants☆41Updated 2 years ago
- ☆27Updated 8 years ago
- vcf file manipulation☆22Updated 10 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- ☆26Updated 4 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 8 months ago
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Updated 6 years ago
- Genomic VCF to tab-separated values☆47Updated 2 years ago
- Variant caller GUI + genetic disease analysis☆22Updated 5 years ago
- TREDPARSE: HLI Short Tandem Repeat (STR) caller☆25Updated 4 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Updated 7 years ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- A method to identify structural variation from sequencing data in target regions☆32Updated 4 years ago
- The CHM1-NA12878 benchmark for single-sample SNP/INDEL calling from WGS Illumina data☆30Updated 7 years ago
- AirLift is a tool that updates mapped reads from one reference genome to another. Unlike existing tools, It accounts for regions not shar…☆27Updated last year
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- Samwell: a python package for using genomic files... well☆20Updated 3 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- A utility for merging and genotyping Illumina-style GVCFs.☆33Updated 6 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago