datacarpentry / DEPRECATED-cloud-genomics-orig
Deprecated - this repository is an outdated fork from datacarpentry/cloud-genomics
☆9Updated 7 years ago
Alternatives and similar repositories for DEPRECATED-cloud-genomics-orig:
Users that are interested in DEPRECATED-cloud-genomics-orig are comparing it to the libraries listed below
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Python bindings for WDL☆10Updated 7 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- ☆43Updated 8 years ago
- ☆18Updated 9 years ago
- Ebola virus surveillance☆16Updated 8 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated last year
- repo for 2016 EDAMAME tutorials☆11Updated 8 years ago
- Snakemake skeleton - Build workflows with Snakemake☆17Updated 10 months ago
- Visualise interstrain recombination from environmental samples.☆26Updated 5 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- A talk on Makesfiles in bioinformatics☆26Updated 11 years ago
- Pipeline for poreathon☆14Updated 10 years ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- vcf file manipulation☆21Updated 9 years ago
- A collection of well-known bioinformatics programs.☆25Updated 9 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Reproducible Phylogenomics☆22Updated 8 years ago
- A library for next generation genomics in Python 3☆18Updated 6 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- ☆13Updated 7 years ago
- ☆20Updated 10 years ago
- blast, shmlast☆22Updated 4 years ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 5 years ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Updated 9 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.