Scripts to Analyze DTC Sequencing and Genotyping Data (and some comparisons to Veritas WGS data)
☆20Nov 28, 2024Updated last year
Alternatives and similar repositories for DTC_Scripts
Users that are interested in DTC_Scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- WES HLA Typing based on multiple alternative tools☆18Mar 8, 2021Updated 5 years ago
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated 6 months ago
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆22Nov 20, 2022Updated 3 years ago
- ☆10Oct 18, 2021Updated 5 years ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆12Sep 28, 2026Updated last month
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆44Nov 18, 2019Updated 6 years ago
- wgs_pipeline☆18Dec 3, 2013Updated 12 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆38Jul 1, 2024Updated 2 years ago
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- ☆26Dec 4, 2019Updated 6 years ago
- Shiny app for geno-pheno catalog☆11Nov 4, 2022Updated 3 years ago
- ☆13Sep 15, 2025Updated last year
- Ultra-fast, high-performing structural variation (SV) detector☆25Apr 26, 2023Updated 3 years ago
- ☆13Dec 10, 2025Updated 10 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆34Aug 9, 2021Updated 5 years ago
- example ruffus pipeline☆18Sep 30, 2011Updated 15 years ago
- A python script used to annotate genomic intervals.☆18May 29, 2020Updated 6 years ago
- Command line interface and Python client library for the One Codex API☆25Updated this week
- Workshop for Machine Learning in pharmacogenomics☆11Jul 8, 2019Updated 7 years ago
- Vidjil -- High-throughput Analysis of V(D)J Immune Repertoire (mirror, please go to http://gitlab.vidjil.org)☆33Jun 29, 2026Updated 4 months ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆21Jun 13, 2022Updated 4 years ago
- Shell wrappers for bulk and 10X single cell NGS pipelines, RNAseq, ChIPseq, ATACseq, CUT&RUN/TAG, GWAS, etc.☆17Oct 12, 2026Updated 2 weeks ago
- SCALLOP-INF analysis☆21Jul 7, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- NSU bioinformatics Python course☆14Sep 24, 2024Updated 2 years ago
- R package to organise and standardise your genomic variant calls obtained with different callers.☆11Jul 15, 2019Updated 7 years ago
- eqtl analysis pipeline using tensorqtl, saige-qtl, LIMIX, quasar and jaxQTL☆18Feb 3, 2026Updated 8 months ago
- Enabling differential allele-specific analysis☆12Sep 10, 2026Updated last month
- a gatk4 pipeline with NA12878 demo dateset ,conda environment used(no GPU)☆15Aug 28, 2019Updated 7 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Aug 17, 2021Updated 5 years ago
- ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps☆23Oct 12, 2017Updated 9 years ago
- ☆20Mar 11, 2024Updated 2 years ago
- Collection of CGAT NGS Pipelines☆43Nov 8, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated 9 months ago
- Realtime base modification frequency tool☆15Sep 16, 2025Updated last year
- Notes on SNP-related tools and genome variation analysis☆29Oct 18, 2026Updated last week
- ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier. From gene expression counts to over 18 subtypes.☆18Jul 30, 2025Updated last year
- RPKM for RNASeq counts☆16Oct 24, 2020Updated 6 years ago
- R package to work with ctDNA sequencing data☆47Feb 20, 2022Updated 4 years ago
- ☆11Jul 13, 2018Updated 8 years ago