VirusMVP is an interactive heatmap-centric app that integrates viral genomic mutations, lineage information and curated functional impact to study the spread and evolution of viruses in Canada and globally.
☆16Jul 21, 2026Updated 2 months ago
Alternatives and similar repositories for VIRUS-MVP
Users that are interested in VIRUS-MVP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆15Jun 5, 2026Updated 4 months ago
- Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.☆12Jan 5, 2023Updated 3 years ago
- A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Remo…☆25Updated this week
- Surveillance of pathogens using population genomics and sequencing☆62Oct 7, 2026Updated last week
- This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.☆18Mar 16, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Customer workshop materials☆19May 13, 2026Updated 5 months ago
- Bacterial Genomics workflow for short(Illumina) and long-read (Oxford Nanopore) sequencing data☆12Feb 20, 2026Updated 7 months ago
- Workflow for MAG quality assessment and taxonomical annotation.☆15May 26, 2026Updated 4 months ago
- TaxTriage is a Nextflow workflow designed to agnostically identify and give confidences of microbial organisms within short- or long-read…☆83Updated this week
- A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.☆42Oct 8, 2026Updated last week
- Snippets extension plugin for VS for the Plotly Dash microframework☆13Apr 26, 2021Updated 5 years ago
- Template for building your own portfolio☆27Jul 2, 2025Updated last year
- Pipeline for the Nanopore 16S and ITS long read clustering and taxonomy classification☆23Jun 12, 2026Updated 4 months ago
- Summarise nucleotide counts at a set of positions in a BAM file to search for mixtures☆13Apr 5, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- MGY441 Bioinformatics: Virus Discovery Project☆25Dec 22, 2025Updated 9 months ago
- Real-time analysis pipeline for nanopore 16S rRNA data☆15Nov 29, 2022Updated 3 years ago
- Parallelised and automated construction of metagenomic classifier databases of different tools☆22Oct 11, 2026Updated last week
- Grow your own Christmas tree within R using tree architectural models☆13Dec 17, 2019Updated 6 years ago
- Tool to submit viral sequences to Genbank.☆16May 14, 2026Updated 5 months ago
- Spaghetti: in situ analysis of 16S rRNA amplicons obtained by nanopore sequencing☆20Jul 26, 2024Updated 2 years ago
- FluMut is a command-line tool to find markers of interest in H5N1 avian influenza viruses.☆15Oct 8, 2026Updated last week
- ☆13Sep 13, 2026Updated last month
- Taxonomic Reconstruction and Analysis of NGS Amplicons - A pipeline based on EMU, a taxonomic profiler optimized for long 16S rRNA reads…☆24Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Docker image build for nextstrain/base☆12Updated this week
- nf-core/phyloplace is a bioinformatics best-practice analysis pipeline that performs phylogenetic placement with EPA-NG.☆12Oct 8, 2026Updated last week
- Influenza genome analysis Nextflow workflow☆28Jun 3, 2026Updated 4 months ago
- Primalscheme3. Generation of highly multiplex primerschemes☆28Sep 24, 2026Updated 3 weeks ago
- Viral (meta)-genome assembly pipeline.☆24Sep 8, 2026Updated last month
- Framework to benchmark algorithms when detecting germline copy number variations (CNVs) from NGS data☆14Dec 24, 2024Updated last year
- A simple pipeline for bacterial assembly and quality control☆17Updated this week
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆21Aug 13, 2026Updated 2 months ago
- PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S rRNA, ITS and COI marker genes☆32Oct 10, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- EcoliTyper: A species-optimized computational pipeline for comprehensive genotyping and surveillance of Escherichia coli. Perfect for cli…☆29Aug 9, 2026Updated 2 months ago
- Quarto template for manuscripts & preprints☆13May 16, 2023Updated 3 years ago
- Distance-based Phylogenetic Placer☆24Sep 8, 2026Updated last month
- Nextstrain build for novel coronavirus SARS-CoV-2☆11Jan 11, 2021Updated 5 years ago
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆26Jan 8, 2026Updated 9 months ago
- A python graphing library for plotting multiple sequence alignments. An app build on top that runs everything in your browser.☆28Mar 22, 2026Updated 6 months ago
- Forest Management Tool a C++ library for forest planning.☆18Updated this week