Alternatives and similar repositories for MendelianRandomization

Users that are interested in MendelianRandomization are comparing it to the libraries listed below

• boxiangliu / locuscomparer
  LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
  ☆119Updated 3 years ago
• rondolab / MR-PRESSO
  Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.
  ☆94Updated 2 years ago
• MRCIEU / ieugwasr
  R interface to the IEU GWAS database API
  ☆105Updated last month
• chr1swallace / coloc
  Repo for the R package coloc
  ☆188Updated 2 months ago
• MRCIEU / gwasglue
  Linking GWAS data to analytical tools in R
  ☆151Updated 3 years ago
• MRCIEU / MRInstruments
  Data objects for various sets of instruments
  ☆47Updated 5 years ago
• RitchieLab / eQTpLot
  Visualization of Colocalization Between eQTL and GWAS Data
  ☆87Updated 3 years ago
• studentyaoshi / MR
  ☆23Updated 2 years ago
• zhenin / HDL
  High-definition likelihood inference of genetic correlations (HDL)
  ☆128Updated last month
• kn3in / mRnd
  Power calculations for Mendelian Randomisation
  ☆24Updated 8 years ago
• mglev1n / ldscr
  LD Score Regression in R
  ☆51Updated 5 months ago
• WSpiller / MVMR
  MVMR R Package
  ☆53Updated 2 weeks ago
• jrs95 / hyprcoloc
  Hypothesis Prioritisation in multi-trait Colocalization
  ☆55Updated last year
• astheeggeggs / PHESANT
  PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
  ☆21Updated 3 years ago
• jean997 / cause
  R package for CAUSE
  ☆56Updated 2 years ago
• josefin-werme / LAVA
  ☆80Updated 2 months ago
• ACDBio / AutoMR
  An R script to perform two sample Mendelian randomization screening (with TwoSampleMR) for a custom summary statistic against a set of su…
  ☆33Updated 3 years ago
• jingshuw / GRAPPLE
  An R package for Mendelian Randomization
  ☆39Updated last year
• Al-Murphy / MungeSumstats
  Rapid standardisation and quality control of GWAS or QTL summary statistics
  ☆94Updated last month
• dingruofan / xQTLbiolinks
  xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
  ☆39Updated last year
• n-mounier / MRlap
  R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples
  ☆67Updated last year
• gamazonlab / MR-JTI
  ☆57Updated last year
• gatelabNW / csf_aging
  Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
  ☆28Updated 2 years ago
• as2970 / EA_brain_AD_MR
  ☆41Updated 4 years ago
• cnfoley / hyprcoloc
  R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data
  ☆59Updated 4 years ago
• HDTian / DRMR
  Doubly-Ranked Stratification in Mendelian Randomization
  ☆11Updated 3 weeks ago
• statgen / METAL
  Meta-analysis of genomewide association scans
  ☆63Updated last year
• gusevlab / fusion_twas
  methods for functional summary-based imputation
  ☆93Updated 3 years ago
• eskederks / eMAGMA-tutorial
  A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.
  ☆72Updated 5 years ago
• mkanai / ldsc-corrplot-rg
  corrplot of LDSC genetic correlation results
  ☆56Updated 3 years ago