uzh / ezRunLinks
An R meta-package for the analysis of Next Generation Sequencing data
☆26Updated this week
Alternatives and similar repositories for ezRun
Users that are interested in ezRun are comparing it to the libraries listed below
Sorting:
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Reactome Pathway Analysis☆43Updated 5 months ago
- Gene-level general linear mixed model☆22Updated 8 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last week
- PAthway Representation and Analysis by Direct Inference on Graphical Models☆45Updated 7 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆40Updated last year
- Lightweight Iterative Gene set Enrichment in R☆57Updated 11 months ago
- Identify cell types and pathways affected by genetic risk loci.☆36Updated last year
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Create QC and summary reports for Alevin output☆31Updated 2 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Analysis for svaseq paper☆19Updated 11 years ago
- Locus Overlap Analysis: Enrichment of Genomic Ranges☆78Updated 5 years ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆25Updated this week
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- countsimQC - Compare characteristic features of count data sets☆29Updated 2 months ago
- Identify and correct invalid gene symbols☆59Updated 10 months ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆31Updated 11 months ago
- ☆29Updated last year
- Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆47Updated 3 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Transcript quantification import with automatic metadata detection☆67Updated this week
- Differential Count Data Analysis Toolbox☆61Updated last year
- An R for fast and flexible DNA methylation analysis☆34Updated 2 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆30Updated 6 years ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 8 months ago
- This is the ensembldb development repository.☆35Updated last month
- A General Framework for Consensus Partitioning☆63Updated 7 months ago