An R meta-package for the analysis of Next Generation Sequencing data
☆32Oct 27, 2026Updated this week
Alternatives and similar repositories for ezRun
Users that are interested in ezRun are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SCASA: Single cell transcript quantification tool☆23Nov 24, 2023Updated 2 years ago
- nRex: Germline and somatic single-nucleotide, short indel and structural variant calling☆12Sep 19, 2025Updated last year
- Probability Model of Accessible Chromatin of Single cells☆11Aug 14, 2026Updated 2 months ago
- Spatial Omics Structure Analysis (sosta)☆10Sep 18, 2026Updated last month
- ☆10Jan 21, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Apr 25, 2019Updated 7 years ago
- A network-based approach for exon set enrichment☆15Jul 16, 2025Updated last year
- (WIP) BuckleScript Web API Bindings☆11Mar 16, 2019Updated 7 years ago
- HGNC Comparison of Orthology Predictions (HCOP)☆15Mar 22, 2018Updated 8 years ago
- ISOform-guided prediction of epiTOPEs in cancer☆13Apr 10, 2023Updated 3 years ago
- AESTETIK: Convolutional autoencoder for learning spot representations from spatial transcriptomics and morphology data☆28Aug 18, 2026Updated 2 months ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆24Oct 17, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Reproducible research workshop RStudio and git demo repository☆11Nov 12, 2016Updated 9 years ago
- ☆11Apr 25, 2024Updated 2 years ago
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 6 years ago
- ☆18Apr 9, 2026Updated 6 months ago
- in silico plasmid extraction☆13Sep 18, 2017Updated 9 years ago
- Debugger for Common Lisp systems.☆10Oct 18, 2024Updated 2 years ago
- JBrowse plugin for methylation related things☆16Oct 9, 2018Updated 8 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Jul 31, 2023Updated 3 years ago
- 最小二乘法多元线性回归(带房价预测实践)Using the least square method for multielement regression☆10Dec 18, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Splicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data☆11Dec 11, 2025Updated 10 months ago
- GPU-accelerated RCTD for spatial transcriptomics☆65Updated this week
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆117Feb 19, 2019Updated 7 years ago
- Repository to support the reproducibility of the results contained in Vaquero et al. manuscript published in eLife☆11Jan 9, 2016Updated 10 years ago
- Formats Roary output for viewing in FriPan☆11May 23, 2018Updated 8 years ago
- Perform differential transcript usage (DTU) analysis of bulk or single-cell RNA-seq data. See documentation at:☆23Mar 30, 2024Updated 2 years ago
- A collection of useful functions for bioinformatics data analysis☆26Mar 19, 2026Updated 7 months ago
- Learning Finite State Machine Models from Data with a Genetic Algorithm☆11Dec 1, 2025Updated 11 months ago
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo …☆12Aug 30, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An example of a data analysis pipeline using Make☆17Jul 26, 2016Updated 10 years ago
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 9 years ago
- Pipeline for designing custom probes against human genes☆24Jan 30, 2026Updated 9 months ago
- Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer☆42Oct 23, 2026Updated last week
- ☆12Feb 12, 2017Updated 9 years ago
- MIX: Combining multiple assemblies from NGS data☆13Apr 14, 2016Updated 10 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆11Mar 13, 2021Updated 5 years ago