UMLS in Python with MongoDB.
☆18Dec 7, 2018Updated 7 years ago
Alternatives and similar repositories for humumls
Users that are interested in humumls are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Load all concepts and relationships from UMLS into a Neo4j database☆13Jan 29, 2021Updated 5 years ago
- Miscellaneous tools for clinical ML☆29Oct 21, 2017Updated 8 years ago
- Developer project for getting basic API integrations working in under 5 minutes☆11Jan 30, 2026Updated last month
- ☆12Apr 13, 2023Updated 2 years ago
- Tool for disambiguating acronyms and abbreviations in text for NLP applications☆22Dec 18, 2025Updated 3 months ago
- Bidirectional Recurrent Neural Network based sequence labeling for Medical Text.☆24May 22, 2016Updated 9 years ago
- Multi-Filter Residual Convolutional Neural Network for Text Classification☆50Mar 31, 2021Updated 4 years ago
- Tools for working with PubMed data.☆15Sep 26, 2020Updated 5 years ago
- KeyTerms centralized terminology management tool☆13Feb 7, 2019Updated 7 years ago
- Python implementations of kNN imputation☆31Mar 16, 2017Updated 9 years ago
- Experiment, Storage and Visualization Framework for Machine Learning research.☆31May 19, 2021Updated 4 years ago
- Cluster paraphrases by word sense☆12Jan 3, 2019Updated 7 years ago
- texrex web page cleaning & ClaraX random walk crawler☆11Dec 13, 2021Updated 4 years ago
- Disambiguating biomedical and clinical concepts with word embeddings☆14Apr 17, 2018Updated 7 years ago
- benchmarks for LLM tokenizers☆17Feb 27, 2026Updated 3 weeks ago
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆37May 21, 2025Updated 10 months ago
- Quantifying biases in BERT embeddings pretrained on MIMIC-III clinical notes☆25Mar 26, 2021Updated 4 years ago
- Processing SIDER 4.1: the side effect resource☆23Feb 3, 2016Updated 10 years ago
- FlexiTokens☆18Dec 27, 2025Updated 2 months ago
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Mar 13, 2023Updated 3 years ago
- ☆11Nov 17, 2018Updated 7 years ago
- Syllabification and stress detection for Spanish☆13Mar 10, 2026Updated last week
- Health NLP Examples☆89Nov 8, 2018Updated 7 years ago
- Google Flan T5☆11Feb 5, 2023Updated 3 years ago
- Nanoloop source files for the album "Prime 16"☆11Mar 7, 2026Updated 2 weeks ago
- ☆12Sep 1, 2021Updated 4 years ago
- Implementation of the algorithm described in "Multi-sentence compression: Finding shortest paths in word graphs" by Katja Filippova.☆12Apr 27, 2015Updated 10 years ago
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 6 years ago
- D2 support for Zed☆21Apr 10, 2025Updated 11 months ago
- Yet Another SEquence Tagger☆10Dec 8, 2022Updated 3 years ago
- Supervised and unsupervised self-organising maps☆12Mar 11, 2026Updated last week
- Implement Overcoming the Lack of Parallel Data in Sentence Compression Katja Filippova and Yasemin Altun Google☆14Nov 22, 2016Updated 9 years ago
- Visualization of electronic medical records or other sequence event data.☆93Mar 8, 2019Updated 7 years ago
- Fast structured perceptron sequential labeler☆15Dec 8, 2015Updated 10 years ago
- Biomedical wordlists (of drugs, genes, etc) for several text mining projects☆19Apr 3, 2023Updated 2 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆40Aug 28, 2020Updated 5 years ago
- ☆10Oct 19, 2023Updated 2 years ago
- System for Medical Concept Extraction and Linking☆436Aug 12, 2024Updated last year
- Trainable embedding transformation for confidence estimation, feature extraction, explainability and conversion from dense to sparse.☆26Jun 9, 2025Updated 9 months ago