OHDSI / PerseusLinks
[under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack
☆38Updated last year
Alternatives and similar repositories for Perseus
Users that are interested in Perseus are comparing it to the libraries listed below
Sorting:
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆67Updated 5 months ago
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆82Updated 4 months ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆115Updated 6 months ago
- Course materials for OHDSI ETL tutorial☆51Updated 10 months ago
- ☆29Updated 2 years ago
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated last month
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆47Updated last week
- ☆29Updated 7 years ago
- A tool to help improve data quality standards in observational data science.☆165Updated this week
- An ETL pipeline to transform your EMP data to OMOP.☆14Updated 2 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46Updated 3 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 9 months ago
- ☆25Updated 6 months ago
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆56Updated 4 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- Data Ingestion and Harmonization☆45Updated 2 weeks ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- Oncology Working Group Repository☆57Updated this week
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago
- Main OMOPonFHIR Settings☆46Updated 3 years ago
- An R package for performing various cohort diagnostics.☆46Updated 3 weeks ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆100Updated last year
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆83Updated this week
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆140Updated 3 weeks ago
- ☆14Updated 5 months ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated last week
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated last year
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆25Updated 4 years ago