jacobvsdanniel / pubmedkb_coreLinks
☆14Updated 3 years ago
Alternatives and similar repositories for pubmedkb_core
Users that are interested in pubmedkb_core are comparing it to the libraries listed below
Sorting:
- a module to calculate the MeSH similarity☆26Updated 4 years ago
- Bioformer: an efficient BERT model for biomedical text mining☆55Updated 2 years ago
- Retrieve and process PubTator annotations☆44Updated 2 years ago
- ☆41Updated 5 years ago
- AIONER☆59Updated last year
- ☆38Updated 3 months ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)☆72Updated last year
- ☆19Updated 3 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 10 months ago
- Repository for student projects within biomedical text mining from Lund University☆55Updated 2 years ago
- Data structures and code to read/write BioC XML and Json.☆32Updated 2 years ago
- ☆57Updated 4 years ago
- ☆28Updated 2 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆24Updated 3 weeks ago
- a module to calculate the MeSH similarity☆26Updated 3 years ago
- ☆19Updated 5 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- Python library for working with BioC files☆13Updated 7 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆20Updated 2 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆34Updated 2 years ago
- Pathway-based sparse deep neural network☆18Updated 4 years ago
- ☆24Updated 4 years ago
- code for Gogleva et al manuscript☆45Updated 2 years ago
- ☆25Updated last year
- A combination of RoBERTa trained from scratch on masking histone modification patterns rather than the English language and XGBoost, pred…☆13Updated 4 years ago
- BioMedBERT: A Pre-trained Biomedical Language Model for QA and IR☆30Updated 4 years ago
- ☆29Updated last year