fhircat / FHIROntopOMOPLinks
FHIR Ontop OMOP Implementation
☆20Updated last year
Alternatives and similar repositories for FHIROntopOMOP
Users that are interested in FHIROntopOMOP are comparing it to the libraries listed below
Sorting:
- Transform the OMOP model to graph model☆27Updated 11 months ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆54Updated this week
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆92Updated 2 years ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆15Updated 5 years ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Updated 2 years ago
- LLM-driven curation assist tool☆100Updated last month
- ☆25Updated 10 months ago
- Natural Language to SQL Queries in the OMOP CDM Datasets☆11Updated 2 years ago
- A tutorial for the ROBOT command line tool.☆17Updated 3 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 5 years ago
- UMLS Graph database for semantic queries☆25Updated 2 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆48Updated last year
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Updated last year
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆34Updated last year
- Public release of the DeepPhe analytic software☆30Updated 2 weeks ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- Integrated OBO ontology store☆48Updated 2 months ago
- A Neo4j Plugin for Handling HL7 FHIR Data☆66Updated 2 years ago
- ETL Tool for converting datasets to OMOP CDM☆34Updated 3 years ago
- ☆13Updated 2 months ago
- Data Ingestion and Harmonization☆46Updated 2 months ago
- An application to interact with your FHIR API's using natural language query☆15Updated 2 years ago
- Winners of the SNOMED CT Entity Linking Challenge☆43Updated last year
- Sketching out an RDF representation for FHIR☆44Updated 5 months ago
- Training materials for Vocabulary & CDM Tutorial.☆22Updated 6 years ago
- Streamlined Data Mapping to OMOP☆19Updated last week
- Representation of Clinical Practice Guideline Recommendations in FHIR☆18Updated 7 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆90Updated 2 years ago
- ☆27Updated 6 months ago