fhircat / FHIROntopOMOPView external linksLinks
FHIR Ontop OMOP Implementation
☆20May 8, 2024Updated last year
Alternatives and similar repositories for FHIROntopOMOP
Users that are interested in FHIROntopOMOP are comparing it to the libraries listed below
Sorting:
- Transform the OMOP model to graph model☆27Dec 13, 2024Updated last year
- An application to interact with your FHIR API's using natural language query☆16Jul 6, 2023Updated 2 years ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆57Feb 3, 2026Updated last week
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆96Oct 3, 2023Updated 2 years ago
- Integrated OBO ontology store☆48Oct 8, 2025Updated 4 months ago
- Natural Language to SQL Queries in the OMOP CDM Datasets☆11Jun 12, 2023Updated 2 years ago
- ☆28Jan 5, 2026Updated last month
- fork of medplum-provider showcasing lang2FHIR API integration☆15Jan 14, 2026Updated last month
- A collection of Helm charts☆10Updated this week
- Template for creating a BioCypher-driven knowledge graph☆13Jan 15, 2026Updated 3 weeks ago
- FHIR to OMOP using PySpark on AWS Glue☆14May 8, 2021Updated 4 years ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆15Sep 28, 2020Updated 5 years ago
- A tutorial for the ROBOT command line tool.☆17Sep 24, 2022Updated 3 years ago
- Representation of Clinical Practice Guideline Recommendations in FHIR☆18May 10, 2025Updated 9 months ago
- Python based FHIR to RDF conversion utility☆15May 28, 2020Updated 5 years ago
- This demonstration showcases potential applications of artificial intelligence (AI) in the implementation of SNOMED CT☆18Jan 5, 2026Updated last month
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Nov 10, 2023Updated 2 years ago
- Sketching out an RDF representation for FHIR☆44Jul 4, 2025Updated 7 months ago
- UMLS Graph database for semantic queries☆26Jan 11, 2023Updated 3 years ago
- Ontology Tutorial☆73Nov 22, 2022Updated 3 years ago
- Conversion from FHIR HL7 to OMOP CDM☆19Jan 29, 2025Updated last year
- This repository is focused on Azure API for FHIR and Power Platform☆21Jun 11, 2024Updated last year
- Streamlined Data Mapping to OMOP☆20Updated this week
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46May 22, 2025Updated 8 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆145Dec 2, 2025Updated 2 months ago
- Customizable translation of OBO graphs to dot for visualization using graphviz and other tools☆26Feb 21, 2025Updated 11 months ago
- ☆25Feb 3, 2025Updated last year
- This is an engine that converts data of one structure to another, based on a configuration file which describes how. There is an accompan…☆237Feb 5, 2026Updated last week
- ☆13Jan 5, 2026Updated last month
- A pipeline for generating and evaluating synthetic data generation models. Currently using SynthVAE to demonstrate functionality. Read mo…☆26Jul 11, 2022Updated 3 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆27Apr 16, 2021Updated 4 years ago
- Unified repository for the GA4GH Beacon v2 API standard☆32Updated this week
- Repository for development of the genomic module of the CDM.☆25Jun 14, 2019Updated 6 years ago
- ☆23Dec 8, 2022Updated 3 years ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆103Mar 19, 2022Updated 3 years ago
- Code for the paper on t-SNE with variable degree of freedom☆25Aug 5, 2020Updated 5 years ago
- Extracting Patients' information from clinical notes and export them to an OMOP CDM database.☆27Jul 14, 2021Updated 4 years ago
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆29May 28, 2021Updated 4 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆34Jan 2, 2024Updated 2 years ago