ImageJ plugin for morphological data mining, 3D modeling and image stitching, registration, editing and annotation.
☆34Oct 1, 2025Updated 5 months ago
Alternatives and similar repositories for TrakEM2
Users that are interested in TrakEM2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Image Stitching Library☆10Jun 18, 2013Updated 12 years ago
- ImageJ plugin suite for image feature extraction☆10Dec 17, 2015Updated 10 years ago
- Simple Maven project for an ImageJ2 command☆34Apr 11, 2022Updated 3 years ago
- Sample code for a Zapier engineering blog post☆14Nov 23, 2013Updated 12 years ago
- This code was submitted to Cell Tracking Challenge, ISBI 2020.☆14May 19, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Legacy project superseded by https://github.com/morphonets/SNT☆13Jul 19, 2021Updated 4 years ago
- A Unified Deep Learning Framework for ssTEM Image Restoration☆12Jul 27, 2022Updated 3 years ago
- Datasets for Drug Discovery and Development☆10Aug 22, 2020Updated 5 years ago
- ☆15Feb 5, 2025Updated last year
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- ☆17Jan 13, 2025Updated last year
- A Rainmeter plugin to show n-number of top processes by either memory or CPU consumption.☆13Jun 6, 2019Updated 6 years ago
- Jupyter Notebooks for the Image Data Resource☆19Feb 20, 2026Updated last month
- Electron Microscopy Images, Neuron Segmentation Task. https://cremi.org☆17Mar 10, 2018Updated 8 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Server-side software for managing peer-to-peer trading networks (circular multilateral barter).☆16Oct 12, 2025Updated 5 months ago
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆46Feb 18, 2025Updated last year
- Create 3D/4D animations using a natural language-based syntax☆61Jun 6, 2025Updated 9 months ago
- Public code for Zheng, Lauritzen et al. (2018)☆15Mar 22, 2019Updated 7 years ago
- 3D feature-based image registration for neuroscience datasets☆14Aug 23, 2017Updated 8 years ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆77Dec 2, 2025Updated 3 months ago
- R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …☆17Jul 15, 2015Updated 10 years ago
- Java pHash☆10Jul 26, 2016Updated 9 years ago
- some demo to show how to write imagepy plugin☆12Jun 25, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An OMERO.web app for creating Figures from images in OMERO☆20Mar 16, 2026Updated last week
- Aligner for large scale serial section image data☆16Jul 7, 2023Updated 2 years ago
- ☆21Mar 11, 2026Updated 2 weeks ago
- MATLAB integration with ImageJ data structures and runtime.☆16Feb 4, 2025Updated last year
- ☆21Sep 9, 2021Updated 4 years ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Sep 3, 2025Updated 6 months ago
- ☆19Jul 17, 2019Updated 6 years ago
- semantic segmentation for magnetic resonance imaging☆16Sep 21, 2021Updated 4 years ago
- Demo java client for tensorflow object detection API☆11Jan 15, 2018Updated 8 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Spark Streaming与OpenCV传感器数据实时获取☆13Jun 20, 2016Updated 9 years ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆20Feb 20, 2026Updated last month
- 🍅 移动端部署,支持YOLOv5s、YOLOv4-tiny、MobileNetV2-YOLOv3-nano、Simple-Pose与Yolact模型,支持iOS、Android,使用NCNN框架。☆13Aug 20, 2020Updated 5 years ago
- DEPRECATED☆10Mar 14, 2020Updated 6 years ago
- ☆14Sep 28, 2024Updated last year
- Targeted Learning entry in the Atlantic Causal Inference Conference's 2017 competition☆12Jul 16, 2017Updated 8 years ago
- ImageJ FX is new user inferface for ImageJ☆27Apr 4, 2019Updated 6 years ago