Alternatives and similar repositories for VessMorphoVis:

Users that are interested in VessMorphoVis are comparing it to the libraries listed below

• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆49Updated 2 years ago
• JacobBumgarner / VesselVio
  An open-source application for the analysis and visualization of segmented vasculature datasets
  ☆103Updated 8 months ago
• mhaft / DeepVess
  ☆29Updated 9 months ago
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆68Updated 3 weeks ago
• phi-max / skel2graph3d-matlab
  MATLAB code to derive the network graph of a 3D voxel skeleton
  ☆24Updated 6 years ago
• vessap / vessap
  Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning
  ☆65Updated 3 years ago
• lassoan / slicerio
  Utilities for reading and writing files created by 3D Slicer
  ☆34Updated 4 months ago
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆50Updated last month
• chcomin / pyvane
  Python Vascular Network Analysis
  ☆22Updated 8 months ago
• neurolabusc / nii2mesh
  Convert NIfTI volume to triangulated mesh using marching cubes
  ☆155Updated 3 weeks ago
• lassoan / SlicerSegmentationRecipes
  Recipes for common medical image segmentation tasks using 3D Slicer
  ☆54Updated 2 years ago
• RUB-Bioinf / VesselExpress
  🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes
  ☆43Updated 7 months ago
• KMarshallX / VesselBoost
  ☆14Updated 3 months ago
• SlicerDMRI / SlicerDMRI
  Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
  ☆78Updated last month
• physimals / quantiphyse
  Application for analysis and modelling of volumetric medical imaging data
  ☆27Updated 8 months ago
• lassoan / SlicerElastix
  This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.
  ☆51Updated this week
• freesurfer / surfa
  Python utilities for medical image and surface-based analysis
  ☆28Updated last month
• MIC-DKFZ / MITK-Diffusion
  MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit
  ☆87Updated 4 months ago
• SteffenCzolbe / pyLDDMM
  Python Implementation of the LDDMM algorithm
  ☆51Updated 4 years ago
• SVRTK / SVRTK
  MIRTK based SVR reconstruction
  ☆48Updated 2 months ago
• zjx1805 / ArteryNetwork
  A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…
  ☆28Updated 3 years ago
• antonfrancois / Demeter_metamorphosis
  Open library for LDDMM and Metamorphosis in PyTorch
  ☆20Updated this week
• visionlyx / HP-VSP
  A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution
  ☆11Updated 8 months ago
• SlicerMorph / SlicerMorph
  Extension to import microCT data and conduct 3D morphometrics in Slicer
  ☆95Updated this week
• 3Scan / 3scan-skeleton
  3D Image Skeletonization Tools
  ☆35Updated last year
• phcerdan / SGEXT
  Spatial Graph Extractor. Library and scripts to study graphs extracted from binary images, or to generate graphs and analyze them complet…
  ☆5Updated 7 months ago
• UK-Digital-Heart-Project / Statistical-Shape-Model
  Statistical shape model of the heart
  ☆43Updated 8 years ago
• ilwoolyu / LocalGyrificationIndex
  LGI: Cortical Shape-Adaptive Local Gyrification Index
  ☆11Updated 4 years ago
• KitwareMedical / ITKContourInterpolation
  An implementation of morphological contour interpolation
  ☆30Updated 4 months ago
• AICONSlab / MIRACL
  Multi-modal Image Registration And Connectivity anaLysis
  ☆36Updated this week