BlueBrain / VessMorphoVisLinks
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels) morphologies.
☆49Updated last year
Alternatives and similar repositories for VessMorphoVis
Users that are interested in VessMorphoVis are comparing it to the libraries listed below
Sorting:
- An open-source application for the analysis and visualization of segmented vasculature datasets☆123Updated last year
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆100Updated 3 weeks ago
- Very fast greedy diffeomorphic registration code☆80Updated 5 months ago
- Convert NIfTI volume to triangulated mesh using marching cubes☆176Updated 6 months ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated 7 months ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆52Updated last year
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆50Updated 3 years ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆169Updated 5 months ago
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆55Updated 2 months ago
- Open library for LDDMM and Metamorphosis in PyTorch☆23Updated last week
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆154Updated 3 years ago
- Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.☆84Updated 8 months ago
- Recipes for common medical image segmentation tasks using 3D Slicer☆60Updated 3 years ago
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆29Updated 3 years ago
- ☆29Updated last year
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆74Updated 4 years ago
- Multi-modal Image Registration And Connectivity anaLysis☆45Updated this week
- The Medical Image Segmentation Tool Set (iSEG) is a fully integrated segmentation (including pre- and postprocessing) toolbox for the eff…☆52Updated 2 years ago
- Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensiti…☆23Updated last month
- Implementation of the DeepVesselNet deep learning network☆152Updated 2 years ago
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆15Updated last year
- MIRTK based SVR reconstruction☆59Updated 6 months ago
- Convert 3D NIfTI images (and other formats supported by ITK) to DICOM 2D series☆89Updated 8 years ago
- High Resolution CT Template Paper and Images☆16Updated last year
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53Updated 5 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆102Updated last month
- The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core librarie…☆198Updated 8 months ago
- Utilities for reading and writing files created by 3D Slicer☆41Updated 9 months ago
- Application for analysis and modelling of volumetric medical imaging data☆28Updated last year
- DMRITool is an open souce toolbox for reconstruction, processing and visualization of diffusion MRI data (DWI, tensor, ODF,EAP, fibers et…☆26Updated 6 years ago