Error-controlled interaction discovery in machine learning models
☆26Jun 24, 2025Updated last year
Alternatives and similar repositories for diamond
Users that are interested in diamond are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Oct 29, 2024Updated last year
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆25Mar 20, 2024Updated 2 years ago
- Code for paper "Principled feature attribution for unsupervised gene expression analysis"☆13Mar 7, 2023Updated 3 years ago
- ☆10Jun 16, 2022Updated 4 years ago
- This repository contains the code used to analyze data for the Pan-disease Human Blood Atlas, a large-scale plasma proteomics resource co…☆17Aug 6, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆22Oct 8, 2025Updated 9 months ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Jul 2, 2024Updated 2 years ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 8 months ago
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆12Nov 2, 2023Updated 2 years ago
- GraphProt: modelling binding preferences of RNA-binding proteins☆21Jul 19, 2018Updated 8 years ago
- Deep direct likelihood knockoffs☆12Feb 2, 2021Updated 5 years ago
- Valid and Powerful Machine-Learning-Assisted Genetic Association Studies☆23Jan 2, 2026Updated 6 months ago
- Evaluating genomic sequence models for explaining personalized expression variation☆20Dec 6, 2023Updated 2 years ago
- Scripts and reference files to type Group A Streptococcus☆11Apr 1, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Efficient algorithms for designing orthogonal DNA sequence libraries☆13Oct 23, 2024Updated last year
- Toolkit for training hyenaDNA-based autoregressive language models on DNA sequences.☆52Oct 4, 2024Updated last year
- ☆15Jun 4, 2023Updated 3 years ago
- ☆29Nov 7, 2023Updated 2 years ago
- ☆11Apr 2, 2024Updated 2 years ago
- ☆11Mar 13, 2022Updated 4 years ago
- Scripts to perform active learning as described in the referenced article.☆13Sep 17, 2025Updated 10 months ago
- ☆17Oct 1, 2023Updated 2 years ago
- PyPEF – Pythonic Protein Engineering Framework☆16Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Similarity-Guided Alignment Algorithm☆31Feb 7, 2026Updated 5 months ago
- [ICML 2026] PASA: A Principled Embedding-Space Watermarking Approach for LLM-Generated Text under Semantic-Invariant Attacks☆23May 13, 2026Updated 2 months ago
- ☆17Jan 30, 2026Updated 5 months ago
- An efficient tool for large-scale correlation network analysis☆15Dec 27, 2024Updated last year
- 推荐算法专题总结相关代码!☆20May 3, 2022Updated 4 years ago
- S2F: protein function without experiments☆16Nov 24, 2025Updated 7 months ago
- ☆16Aug 1, 2022Updated 3 years ago
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- ☆31Jul 8, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆13Apr 23, 2025Updated last year
- Trainable representation analysis study repository☆44Apr 5, 2022Updated 4 years ago
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆11Dec 3, 2023Updated 2 years ago
- ☆25Aug 20, 2024Updated last year
- Annotated sequence data☆11Feb 2, 2025Updated last year
- Deep learning based imputation of RNA secondary structure profile.☆16May 1, 2022Updated 4 years ago
- Code for reproducing the paper: RANG: A Residual-based Adaptive Node Generation Method for Physics-Informed Neural Networks☆16May 2, 2022Updated 4 years ago