Valid and Powerful Machine-Learning-Assisted Genetic Association Studies
☆23Jan 2, 2026Updated 7 months ago
Alternatives and similar repositories for POP-TOOLS
Users that are interested in POP-TOOLS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Network representation of LDSC results☆32Mar 16, 2022Updated 4 years ago
- Vector Approximate Message Passing inference framework for GWAS☆20Jun 12, 2026Updated 2 months ago
- ☆14Jun 24, 2024Updated 2 years ago
- An analytical approach for GWAS-by-Subtraction☆15May 27, 2025Updated last year
- ☆14Aug 13, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆22Aug 22, 2026Updated last week
- Fine-tuning polygenic risk score models using GWAS summary statistics☆57Oct 19, 2025Updated 10 months ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated last year
- Evaluating genomic sequence models for explaining personalized expression variation☆20Dec 6, 2023Updated 2 years ago
- Estimate genetic correlation using predicted expression☆28Mar 8, 2018Updated 8 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆14Aug 8, 2025Updated last year
- Cross-population weighting framework to improve genetic risk prediction in ancestrally diverse populations☆18Feb 19, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆21Nov 15, 2024Updated last year
- Estimates partitioned heritability and enrichment for gene sets in complex human traits.☆26Sep 12, 2025Updated 11 months ago
- corrplot of LDSC genetic correlation results☆59Mar 16, 2022Updated 4 years ago
- Automatically exported from code.google.com/p/densitree☆32Jul 27, 2025Updated last year
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆37Jan 28, 2026Updated 7 months ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆20Nov 26, 2023Updated 2 years ago
- Efficient Local Ancestry Inference☆17Nov 10, 2025Updated 9 months ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- ☆31Oct 18, 2021Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆39Apr 11, 2025Updated last year
- Integrate multiple genome assemblies into a pangenome graph☆37Jun 9, 2022Updated 4 years ago
- causal TWAS (cTWAS)☆52May 7, 2026Updated 3 months ago
- Package for genetic network analysis of GWAS summary statistics☆18Aug 24, 2025Updated last year
- ☆13Sep 11, 2025Updated 11 months ago
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆19Feb 9, 2023Updated 3 years ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- ☆14Jul 1, 2025Updated last year
- ☆22Feb 19, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆44Jun 22, 2026Updated 2 months ago
- Python package to predict enhancer-gene interactions supervised on CRISPRi data☆16Nov 21, 2023Updated 2 years ago
- ☆22Apr 23, 2026Updated 4 months ago
- ☆21Aug 20, 2024Updated 2 years ago
- Calling disease-related genes☆17Apr 1, 2026Updated 5 months ago
- SSRMMD: A Rapid and Accurate Algorithm for Mining SSR Feature Loci and Candidate Polymorphic SSRs Based on Assembled Sequences.☆16Sep 2, 2020Updated 5 years ago
- Meta-analysis of genomewide association scans☆69Jul 18, 2024Updated 2 years ago