Valid and Powerful Machine-Learning-Assisted Genetic Association Studies
☆23Jan 2, 2026Updated 2 months ago
Alternatives and similar repositories for POP-TOOLS
Users that are interested in POP-TOOLS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Vector Approximate Message Passing inference framework for GWAS☆18Jan 14, 2026Updated 2 months ago
- Network representation of LDSC results☆31Mar 16, 2022Updated 4 years ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆16Oct 7, 2025Updated 5 months ago
- ☆21Sep 12, 2025Updated 6 months ago
- ☆14Jun 24, 2024Updated last year
- Cross-population weighting framework to improve genetic risk prediction in ancestrally diverse populations☆17Feb 19, 2026Updated last month
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Oct 19, 2025Updated 5 months ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 7 months ago
- ☆13Oct 1, 2025Updated 5 months ago
- ☆21Nov 15, 2024Updated last year
- The local version of high-definition likelihood inference of genetic correlations (HDL-L)☆12Aug 8, 2025Updated 7 months ago
- Evaluating genomic sequence models for explaining personalized expression variation☆20Dec 6, 2023Updated 2 years ago
- ☆50Jun 24, 2025Updated 9 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- Estimate genetic correlation using predicted expression☆25Mar 8, 2018Updated 8 years ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆34Jan 28, 2026Updated last month
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Nov 26, 2023Updated 2 years ago
- Automatically exported from code.google.com/p/densitree☆29Jul 27, 2025Updated 7 months ago
- corrplot of LDSC genetic correlation results☆57Mar 16, 2022Updated 4 years ago
- GWAS for survival analysis in large cohorts☆22Jul 24, 2024Updated last year
- Efficient Local Ancestry Inference☆17Nov 10, 2025Updated 4 months ago
- causal TWAS (cTWAS)☆47Updated this week
- ☆19Updated this week
- ☆14Jul 1, 2025Updated 8 months ago
- ☆30Oct 18, 2021Updated 4 years ago
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Feb 9, 2023Updated 3 years ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Tissue-Gene Fine-Mapping☆27Mar 20, 2025Updated last year
- Integrate multiple genome assemblies into a pangenome graph☆37Jun 9, 2022Updated 3 years ago
- ☆13Sep 11, 2025Updated 6 months ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆15Apr 22, 2024Updated last year
- Python package to predict enhancer-gene interactions supervised on CRISPRi data☆15Nov 21, 2023Updated 2 years ago
- ☆20Feb 19, 2025Updated last year
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆27Dec 10, 2025Updated 3 months ago
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Jan 30, 2025Updated last year
- ☆21Aug 20, 2024Updated last year
- ☆33Apr 11, 2025Updated 11 months ago