Alternatives and similar repositories for lightning-server-legacy:

Users that are interested in lightning-server-legacy are comparing it to the libraries listed below

• yvdriess / precipes
  Parallel Recipes : parallel workflow execution made easy
  ☆13Updated 9 years ago
• PriceLab / snapr
  SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis
  ☆25Updated 9 years ago
• arq5x / piledriver
  Basic, no assumptions, multi-pileup
  ☆24Updated 10 years ago
• amplab / smash
  Benchmarking toolkit for variant calling
  ☆47Updated 4 years ago
• blachlylab / mucor
  ☆12Updated 8 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• KHP-Informatics / bioindocker15
  [Bio in Docker] Symposium 2015
  ☆21Updated 7 years ago
• BioInterchange / Ontologies
  Home of the Genomic Feature and Variation Ontology (GFVO)
  ☆16Updated 3 years ago
• medvedevgroup / varmatch
  robust matching of small variant datasets using flexible scoring schemes
  ☆10Updated 4 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• refresh-bio / GTC
  GenoTypes Compressor
  ☆15Updated 2 years ago
• bmeg / funnel-client
  Trigger the Google Genomics Pipeline API with CWL
  ☆11Updated 8 years ago
• roryk / bcbio.rnaseq
  Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …
  ☆24Updated 7 years ago
• ekg / 1000G-integration
  variant integration methods for the 1000 Genomes Project
  ☆21Updated 7 years ago
• brentp / hts-python
  pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
  ☆49Updated 7 years ago
• bioboxes / rfc
  Request for comments on interchangeable bioinformatics containers
  ☆40Updated 5 years ago
• boutroslab / cld
  A software for the multispecies design of CRISPR/Cas9 libraries
  ☆34Updated 2 years ago
• Steven-N-Hart / VariantDB_Challenge
  Finding a scalable alternative to the VCF File for genomics analysis
  ☆14Updated 8 years ago
• iqbal-lab / cortex
  reference free variant assembly
  ☆33Updated last year
• ekg / glia
  a string to graph aligner
  ☆41Updated 8 years ago
• raphael-group / NAIBR
  Novel Adjacency Identification with Barcoded Reads
  ☆13Updated 2 years ago
• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 7 years ago
• uio-cels / genomicgraphcoords
  Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes
  ☆11Updated 7 years ago
• BoevaLab / SV-Bay
  Detection of structural variants in cancer mate-pair and paired-end data
  ☆12Updated 5 years ago
• gkno / gkno_launcher
  The gkno launcher for executing tools or pipelines
  ☆32Updated 8 years ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 3 years ago
• DecodeGenetics / BamHash
  ☆37Updated 4 years ago
• raphael-group / AncesTree
  An algorithm for clonal tree reconstruction from multi-sample cancer sequencing data
  ☆14Updated 6 years ago
• splatlab / debgr
  deBGR: An Efficient and Near-Exact Representation of the Weighted de Bruijn Graph
  ☆30Updated 4 years ago
• vgteam / xg-old
  succinct labeled graphs with collections and paths
  ☆15Updated 6 years ago